Saccharomyces cerevisiae (budding yeast): YMR231W
Help
Entry
YMR231W CDS
T00005
Symbol
PEP5, END1, VAM1, VPL9, VPS11, VPT11
Name
(RefSeq) tethering complex subunit PEP5
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04138
Autophagy - yeast
sce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
YMR231W (PEP5)
04148 Efferocytosis
YMR231W (PEP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YMR231W (PEP5)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
YMR231W (PEP5)
Hops complex
YMR231W (PEP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
VPS11_N
TPR_PEP5_VPS11
VPS11_C
zf_RING_Vps8
zf-C3H2C3
zf-RING_Vps41
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
PHD_NSD
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_2
zf-rbx1
zf-RING_16
TPR_GEMI5
zf-C3HC4
Pellino_RING
Prok-RING_1
PHD
Motif
Other DBs
NCBI-GeneID:
855271
NCBI-ProteinID:
NP_013958
SGD:
S000004844
UniProt:
P12868
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:733545..736634
Genome browser
AA seq
1029 aa
AA seq
DB search
MSLSSWRQFQLFENIPIRDPNFGGDSLLYSDPTLCAATIVDPQTLIIAVNSNIIKVVKLN
QSQVIHEFQSFPHDFQITFLKVINGEFLVALAESIGKPSLIRVYKLEKLPNREQLYHSQV
ELKNGNNTYPISVVSISNDLSCIVVGFINGKIILIRGDISRDRGSQQRIIYEDPSKEPIT
ALFLNNDATACFAATTSRILLFNTTGRNRGRPSLVLNSKNGLDLNCGSFNPATNEFICCL
SNFIEFFSSSGKKHQFAFDLSLRKRIFCVDKDHILIVTEETGVPTTSISVNELSPTIINR
IFIIDAKNKIISLNFVVSSAIIDIFSTSQSGKNITYLLTSEGVMHRITPKSLENQINIII
QKELYPFALQLAKQHSLSPLDVQEIHKKYGDYLFKKGLRKEATDQYIQCLDVVETSEIIS
KFGVKEVPDPESMRNLADYLWSLIKNSISQRDHVTLLLIVLIKLKDVEGIDTFIQHFDRK
GIWNEGVVMDDMDDVTFFYSDNDFFDLDLILELMKESDFKRLSYRLAKKYSKDSLIIVDI
LLNLLHNPVKAIKYIKSLPIDETLRCLVTYSKKLLEESPNETNALLIEVFTGKFKPSTFE
VDLDRRDTTGDFSENIRTVFYSYKTFFNYMNSNGTSDAMSESSEASHEHEEPTYHPPKPS
IVFSSFVTKPFEFVVFLEACLACYQQYEGFDEDRQVILTTLYDLYLNLAQNDVPERIDDW
RSRATGVLRESNKLVYSAASNNTSKRVDNSIMLLISHMDQSSASAKDKTKIDIASFANDN
PEMDLLSTFRAMTLNEEPSTCLKFLEKYGTEEPKLLQVALSYFVSNKLIFKEMGGNEVLK
EKVLRPIIEGERMPLLDIIKALSRTNVAHFGLIQDIIIDHVKTEDTEIKRNEKLIESYDK
ELKEKNKKLKNTINSDQPLHVPLKNQTCFMCRLTLDIPVVFFKCGHIYHQHCLNEEEDTL
ESERKLFKCPKCLVDLETSNKLFEAQHEVVEKNDLLNFALNSEEGSRDRFKVITEFLGRG
AISYSDITI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagctcctggaggcaattccagcttttcgagaatattcccataagagatcct
aattttggaggagattccctattgtactcggacccaacactttgcgcagctacaatagta
gatcctcaaactctgatcatagctgtaaattcaaatattataaaagttgtcaaattaaat
caatcgcaagtaatacatgaatttcaatcttttcctcatgattttcaaatcactttcctg
aaagtcatcaacggggaatttctcgtagcgttagctgaatccattggcaaaccttcccta
ataagagtatataaactagaaaaactgccaaatagagaacaactataccattcacaagtc
gaactgaaaaacggtaataatacataccctatttcagttgtctccatatcaaatgacctt
tcctgtattgtggttggattcattaatgggaaaatcatccttattagaggtgacatttca
agagatagaggatctcaacaaaggattatatatgaagatccaagtaaagagccaataaca
gctttattcctcaataacgacgcaacggcttgttttgcggctacaacttcaagaatcctt
ttatttaatacgactggtagaaatagagggcgcccaagtttggttttaaattcaaaaaat
ggcctggatctaaattgtggatcttttaatccggcaacaaacgaatttatatgttgctta
agcaactttatcgaatttttcagctctagtggaaaaaagcatcaattcgcatttgatcta
tcgctgagaaagaggatattttgtgtagataaagatcacattttgattgtgactgaggaa
acaggtgtaccaactacatccataagtgttaatgaactgtcgcccacaataattaaccga
atattcatcattgatgctaaaaataaaatcatttctttgaattttgttgtttctagtgca
attattgatattttttcaacctctcagagcggtaaaaacatcacttatctgctaacttct
gaaggagtaatgcataggataactccaaaatctttagaaaatcaaattaacatcatcatc
caaaaggaactgtacccttttgctttacaattagcgaaacagcattcattatcaccgcta
gatgttcaggaaattcataaaaaatatggtgattatctctttaaaaagggactcaggaag
gaagcaacagaccagtacatacaatgtctggacgttgtggaaactagtgaaatcatttca
aaatttggtgtcaaggaggttcctgacccagagagtatgaggaacttggctgactatctg
tggtctttgatcaagaattctatttctcaacgcgatcatgttacccttttgttaattgtt
ttaatcaaattgaaggatgttgaaggaattgatacttttatccagcatttcgatagaaaa
ggcatttggaatgaaggtgttgtgatggacgatatggatgatgtgacgtttttttattca
gataacgatttttttgatttagatttaatcttagagcttatgaaagagtcagattttaag
cgtctctcatacagacttgcaaagaagtattcaaaggattcattaattattgtggatatt
ttattgaatctattgcataaccctgtaaaagccataaaatacataaaaagtttaccaatt
gatgaaaccctaagatgccttgtgacgtactcgaaaaaattactggaggagtcaccgaat
gaaactaatgctttactgatagaagtatttacagggaagttcaaaccatccacttttgaa
gtggatctggaccggagagatacgacgggcgatttttctgaaaatattagaacagttttt
tacagttacaaaacattcttcaactacatgaactcaaatggtacatcagacgcaatgagc
gagtcttcagaggcatcccacgaacatgaagagcctacttatcatccgccgaagccatcc
attgttttcagttcattcgttacaaaaccttttgaatttgttgttttcttagaagcctgt
ttggcatgttaccagcagtatgagggttttgacgaagataggcaagtaattttgactact
ttatatgacttatatttgaatttggcgcaaaatgatgtacccgagcgtatagacgactgg
cgttcaagagcaactggcgtattgcgtgagagcaataaattggtgtattctgccgcaagt
aataatactagcaaaagggtggataactcaataatgctgttaatttcccatatggatcaa
agtagtgcttcagcaaaagataagacgaaaattgacatagcttcatttgccaatgataac
cccgagatggatttgctgagtacatttagggctatgacgttaaatgaagaaccaagtact
tgtctcaaattcctagaaaaatatggcacagaggaacccaagctcttacaagtagcattg
agttactttgtttctaataaactaatcttcaaggagatgggcggtaatgaagtactgaaa
gaaaaagtattgaggccaattatagagggggaaagaatgccactgttggatataattaaa
gcgctatcccgtacaaatgtagcccactttgggctgatacaagacatcattattgatcat
gtcaaaaccgaagatacagaaatcaaaaggaacgaaaaactaattgaatcttacgataaa
gagttaaaggagaaaaacaagaagttgaagaacaccattaattcagatcaacctctccac
gtacccctgaagaatcaaacgtgtttcatgtgtagactgacattggatattcctgtagtt
ttttttaaatgtggtcacatttaccaccaacattgtctaaatgaggaagaagatactcta
gaaagcgagagaaagctctttaaatgtcccaaatgcttggtggacttagaaacctccaac
aaactttttgaagctcaacacgaagtagttgaaaagaatgatcttttgaattttgcatta
aacagtgaagaaggtagtagagaccgtttcaaagtcataacagagtttttaggtagaggt
gccatcagttattctgacatcactatttaa
DBGET
integrated database retrieval system
