Saccharomyces cerevisiae (budding yeast): YNL082W
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Entry
YNL082W CDS
T00005
Symbol
PMS1
Name
(RefSeq) ATP-binding mismatch repair protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YNL082W (PMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sce03400
]
YNL082W (PMS1)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
YNL082W (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
855642
NCBI-ProteinID:
NP_014317
SGD:
S000005026
UniProt:
P14242
Structure
PDB
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All DBs
Position
XIV:473391..476012
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AA seq
873 aa
AA seq
DB search
MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN
GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA
DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA
IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK
NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN
EVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYYNRQE
LALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNSTTGVI
DKSNGTELTSVMDGNYTNVTDVIGSECEVSVDSSVVLDEGNSSTPTKKLPSIKTDSQNLS
DLNLNNFSNPEFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNEC
HEHTNDCCHQERRGSTDTEQDDEADSIYAEIEPVEINVRTPLKNSRKSISKDNYRSLSDG
LTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQGEK
YLTLTVSKNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVF
KSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLF
DLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLS
ELDKPWNCPHGRPTMRHLMELRDWSSFSKDYEI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaattcatcagataaacgatatagatgttcatcgaattacatctggacaagtt
atcaccgacttaacaactgcagtgaaagaactcgttgataatagtatagatgcgaacgca
aaccagatcgaaataatctttaaagattatggtcttgaatctatcgaatgttctgataat
ggtgatggcatagacccttcaaattatgagttcttagctttaaaacattacacatcaaaa
attgcgaaatttcaagatgttgctaaagtacagacgttagggtttagaggggaggcccta
tcttctttatgtggcatagctaaactaagtgtgataacaacaacttcaccaccaaaagcg
gataagttggagtatgatatggtcggtcacattacttcaaagacaacgacatcaagaaat
aaagggacgaccgtgttagtttcgcagttatttcataacttgcccgttagacagaaagaa
tttagcaaaacttttaagcgccagtttaccaaatgtctcacagttatacaaggttatgca
atcataaatgctgccattaaattttcagtttggaatatcacaccaaagggtaaaaaaaat
ctaattctatcaacaatgagaaattcaagtatgagaaagaatatatcctcagtattcggt
gcaggtggtatgcgtgggcttgaagaggttgatttagtgcttgatttaaatcccttcaag
aatagaatgcttgggaaatacaccgatgatcctgatttcttagacctcgattataaaatt
cgagtgaagggctatatatcacagaattcgtttggttgtggtagaaatagtaaggatagg
caattcatttatgtgaataaaaggccagtggaatactctacgcttttaaaatgctgcaat
gaggtttacaaaacgttcaataatgttcaatttccggctgtatttctcaatcttgaatta
cccatgagcttaattgatgtaaacgtcactccagacaaaagagtgatactgttgcacaac
gaacgggccgtcattgatattttcaaaacaactctcagtgattattacaatagacaagaa
ttagctcttcccaaaagaatgtgctcacaatcagaacaacaagctcagaaaagacttaaa
acggaagtctttgatgatagaagcacaacacacgaatccgataatgaaaactatcatacc
gccagaagcgaaagtaatcaatccaatcatgcacattttaatagtactactggcgtaata
gacaaaagtaatggtacagaactaacttctgtgatggacggtaattatactaatgtcact
gatgtcatcggttcggagtgtgaagtttcggttgattcatcagttgtattggatgagggc
aactcaagtacaccgactaagaagctgccaagtatcaaaacagattctcaaaacctaagt
gatctgaacctgaataatttttccaatcctgaatttcaaaatataactagtccagataaa
gcacgtagcttggaaaaagttgttgaagaaccagtttattttgatattgatggtgaaaag
ttccaagaaaaagcggttctatcacaagcagatggtttagtttttgtagataatgaatgt
catgagcatacaaatgactgctgtcatcaagaaagaagaggaagtactgacacagaacaa
gatgatgaagctgactctatatacgcagagattgagccagttgaaatcaatgtgagaact
cctctaaagaactcacgtaaatcgatttccaaagataattataggtcattgagtgatgga
ttgacgcatcgcaaattcgaagatgagatattggagtacaatttaagcacaaaaaatttt
aaagaaataagtaaaaatggcaaacaaatgagtagcatcataagtaaaagaaaatcagaa
gctcaagaaaacattatcaaaaataaggacgaactagaggatttcgaacaaggagaaaag
tatctgacgttaacagtttcaaaaaatgattttaaaaaaatggaggttgttggacaattt
aatttaggatttatcatagtgaccagaaaagttgataacaaatatgatctgtttattgtc
gatcagcatgcaagtgatgaaaagtataatttcgaaacactgcaggccgtgacagttttt
aaatcgcagaaattgataatacctcagccggtagaattaagtgtcattgatgaacttgtg
gtgctggacaatttaccagtttttgaaaagaatggattcaaattgaaaattgacgaagaa
gaagagtttggctccagagttaagctgttaagcttacctacttccaaacaaacccttttt
gatttgggtgattttaatgaactgatacatttgatcaaagaagacggtgggttacgaaga
gacaacatcagatgttccaagattcgttctatgtttgctatgagagcatgtagaagtagt
ataatgataggtaaaccgctgaataagaagactatgaccagagtcgttcataatctcagt
gaacttgataagccttggaattgtccccatggacgtccaacaatgagacatttaatggaa
ttacgtgattggagctcattttcgaaggattacgaaatatga
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