KEGG   Saccharomyces cerevisiae (budding yeast): YNL253W
Entry
YNL253W           CDS       T00005                                 
Symbol
TEX1
Name
(RefSeq) Tex1p
  KO
K12880  THO complex subunit 3
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  Nucleocytoplasmic transport
sce03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    YNL253W (TEX1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    YNL253W (TEX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YNL253W (TEX1)
   03041 Spliceosome [BR:sce03041]
    YNL253W (TEX1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     YNL253W (TEX1)
Spliceosome [BR:sce03041]
 Complex C
  Other components
   EJC/TREX
    YNL253W (TEX1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    YNL253W (TEX1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_Gbeta Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_IFT140_1st ASA1 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd DUF4130 DUF7683
Other DBs
NCBI-GeneID: 855468
NCBI-ProteinID: NP_014146
SGD: S000005197
UniProt: P53851
Structure
LinkDB
Position
XIV:170018..171286
AA seq 422 aa
MSTIGAVDILNQKTITSEVAASVTSKYLQSTFSKGNTSHIEDKRFIHVSSRSHSRFTSTP
ITPNEILSLKFHVSGSSMAYSRMDGSLTVWFIKDASFDKSVEVYIPDCCGSDKLATDLSW
NPTSLNQIAVVSNSSEISLLLINEKSLTASKLRTLSLGSKTKVNTCLYDPLGNWLLAATK
SEKIYLFDVKKDHSSVCSLNISDISQEDNDVVYSLAWSNGGSHIFIGFKSGYLAILKAKH
GILEVCTKIKAHTGPITEIKMDPWGRNFITGSIDGNCYVWNMKSLCCELIINDLNSAVTT
LDVCHLGKILGICTEDEMVYFYDLNSGNLLHSKSLANYKTDPVLKFYPDKSWYIMSGKND
TLSNHFVKNEKNLITYWKDMFDNTMIEKRRKNNGGGNNHNKRTSKNTDRIGKDRPSRFNS
KK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcgacaattggagctgttgatattcttaatcaaaagaccataacttctgaagtggct
gcctcagtgacttcaaaatatctacaaagtacgttttctaaaggtaatacaagtcatatc
gaagataaaaggttcattcatgtcagttcgcgttctcattcaagattcacctcgactccc
ataactccaaatgaaattctttccctaaaatttcacgtatcaggttcatcgatggcgtat
agtagaatggatgggtcattgaccgtttggtttattaaagatgcaagttttgacaaatct
gtagaagtttatattccagactgttgtggttccgataaattggctactgatttgtcctgg
aaccctacttctttaaatcaaatagctgtcgtgagcaattcatcagagatatccttactc
ttaatcaacgaaaaatcgctaacggcatccaaattaaggaccttgtcattgggaagcaag
actaaggtcaacacatgtctttatgatccattaggaaactggttattagctgccaccaaa
tctgagaaaatctacttgtttgatgtgaaaaaggatcacagctctgtctgttctttgaac
atcagcgatataagccaagaggataatgacgttgtgtattccttagcatggagcaatggt
ggaagtcatatatttattggctttaagagtggttatttggccattttaaaagcaaaacat
ggcatattggaggtttgtaccaaaattaaagcacatactggtcctataaccgagatcaaa
atggacccatggggaagaaacttcattactgggagtatcgatgggaattgctacgtatgg
aatatgaagtcactatgttgtgaattaataattaacgatttgaactctgcggtaacaaca
ctagacgtctgtcatttgggtaaaatactaggaatttgtacagaagatgaaatggtatat
ttctatgatcttaatagtggtaatttactccactctaaatctttagccaattacaaaacc
gatcccgttttgaagttttatcctgataaatcatggtatatcatgtcaggcaagaatgac
acactatcaaatcattttgttaaaaacgaaaaaaatctaataacttattggaaagacatg
ttcgataacacgatgattgaaaaacgtaggaaaaacaacggtggaggcaacaaccacaat
aaaaggacgagtaagaatactgataggattggcaaggataggccgagtagattcaactca
aaaaaataa

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