Saccharomyces cerevisiae (budding yeast): YOL090W
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Entry
YOL090W CDS
T00005
Symbol
MSH2, PMS5
Name
(RefSeq) mismatch repair ATPase MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YOL090W (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sce03400
]
YOL090W (MSH2)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
YOL090W (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
854063
NCBI-ProteinID:
NP_014551
SGD:
S000005450
UniProt:
P25847
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All DBs
Position
XV:147382..150276
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AA seq
964 aa
AA seq
DB search
MSSTRPELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHT
QSVLKNCQLDPVTAKNFHEPTKYVTVSLQVLATLLKLCLLDLGYKVEIYDKGWKLIKSAS
PGNIEQVNELMNMNIDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNEVY
SNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVELD
LTKLLGDDLALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMKLDAS
AIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNHCKTNAGVRLLNEWLKQ
PLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKRGNLEDVLKIYQ
FSKRIPEIVQVFTSFLEDDSPTEPVNELVRSVWLAPLSHHVEPLSKFEEMVETTVDLDAY
EENNEFMIKVEFNEELGKIRSKLDTLRDEIHSIHLDSAEDLGFDPDKKLKLENHHLHGWC
MRLTRNDAKELRKHKKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDKQQSALVREII
NITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERRTHLISSRHPV
LEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAE
IAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELGRGTSTYDGFG
LAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLKEQKHDDEDIT
LLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDDLKTNNEDLKKAKLSLQEVN
EGNIRLKALLKEWIRKVKEEGLHDPSKITEEASQHKIQELLRAIANEPEKENDNYLKYIK
ALLL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccactaggccagagctaaaattctctgatgtatcagaggagagaaacttctat
aagaagtatacagggttgccgaagaaaccattaaaaaccattagattagtggataaaggc
gactattacacagttataggttcagatgcgatatttgtggcagattcagtctatcatact
caatctgttttaaagaactgccaattggaccctgtaacggcaaagaacttccatgaacca
actaaatatgttactgtttcgctacaagttcttgccactctgctgaagttatgtttgttg
gatctgggatataaagttgagatatacgataagggttggaaattaataaaaagcgcatct
ccagggaacattgagcaagttaatgagctaatgaatatgaatattgattcgagtatcatc
attgcaagtttgaaagttcaatggaattcccaagatggaaactgcattattggagttgct
ttcattgataccactgcatacaaggtgggaatgcttgatattgtcgataatgaagtgtat
tccaacctagagagtttcttgattcaattgggtgtaaaggaatgtttggtgcaggacttg
acatcaaattcaaactccaatgctgaaatgcagaaagtaataaatgtaattgatcgctgt
gggtgcgtcgttacattattgaaaaactcagaattttctgaaaaagatgtcgaactggat
ttaaccaagttactgggcgatgatttggcattatcgttaccacaaaaatactctaaatta
tctatgggtgcatgcaatgcattgattggatatttacaattgctctcagagcaagatcaa
gtaggcaagtatgaattagttgaacataaattaaaggagtttatgaagttggatgcctcc
gctattaaagcccttaatttattcccacaaggaccacaaaatccatttggtagcaacaat
ttagctgtatctggatttacgagtgctggtaattctggtaaagtaacttctcttttccag
ttactgaatcattgcaaaacaaatgctggtgttcggcttttaaatgaatggttgaagcaa
ccactgaccaatattgacgaaattaataaaagacatgatttagtcgactatctaattgac
caaatcgagttaagacagatgttgacttctgaatatttacccatgattccagatattcgt
agattgactaagaaattaaataaaagaggaaacttagaggatgtcttgaaaatttaccaa
ttcagtaaaagaataccagaaattgttcaagttttcacttcgttcttggaggacgacagc
cccactgaaccagtaaacgaactggtccgctccgtttggctagctcctttaagccaccac
gttgaacctttgtccaaattcgaagaaatggttgaaacaacggttgatttggatgcttat
gaagaaaataacgaatttatgattaaagttgagtttaatgaggaattaggaaagataaga
agtaaactggatacgttgcgtgatgaaattcattcaatccatcttgattctgctgaagat
ctaggattcgatccggacaaaaaactgaagttggagaaccatcatctgcatggttggtgt
atgaggttgacacgtaatgacgccaaggagttacgtaaacataagaagtacattgagttg
tcgacagtaaaagctggtatattttttagtaccaaacaattaaagtcaatcgccaatgaa
accaatattcttcaaaaggagtacgacaagcaacaatcggctctggttagagaaattata
aatattacattaacgtacacaccagtttttgaaaaactatccttagtcttagcgcattta
gatgtgattgcctcttttgctcatacttcctcgtatgctcctataccatacattagaccc
aagttgcatcccatggattcggaaagaagaactcacctaataagctcccgtcatccagta
ctggaaatgcaagacgatataagctttatatctaatgatgtcacattagagagtggaaag
ggcgactttttaatcataactggaccaaacatgggaggtaaatctacttacatcagacag
gttggtgtgatttctttaatggcccaaattggttgtttcgtaccttgtgaagaagctgaa
atagccatagtagatgcaattctttgcagggtcggggcaggagattcccaattgaaaggt
gtttccacatttatggttgaaatattggaaactgcttctatactaaagaatgcgagtaag
aattctttgattattgtagatgaactagggcgtggtactagtacatatgatggttttggt
ctagcttgggcaattgctgaacatatcgcaagtaagattggatgtttcgctttgtttgca
actcactttcatgaattgacagaattgtctgaaaaattgcccaatgtcaagaatatgcat
gttgttgcacatatcgagaaaaatttaaaagaacaaaaacatgacgatgaggacatcacg
ttgttatacaaagttgagcctggtatttcagatcagtcttttggtattcatgttgcagaa
gttgttcaatttccagaaaaaattgttaaaatggctaaacgtaaagccaatgaattggac
gatctaaaaactaataatgaagatttgaaaaaagctaagctatcattacaggaagttaac
gaaggtaatattcgtttgaaggctttactgaaagagtggattagaaaagtgaaggaggag
ggtttacatgacccaagcaaaattactgaagaagcttcccagcataaaatacaagagcta
ttgcgtgctatagcaaatgaaccagaaaaggaaaacgataattacctgaaatatataaaa
gccttgttgttataa
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