Saccharomyces cerevisiae (budding yeast): YOL125W
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Entry
YOL125W CDS
T00005
Symbol
TRM13
Name
(RefSeq) tRNA:m4X modification enzyme
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sce03016
]
YOL125W (TRM13)
Enzymes [BR:
sce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
YOL125W (TRM13)
Transfer RNA biogenesis [BR:
sce03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
YOL125W (TRM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
853995
NCBI-ProteinID:
NP_014516
SGD:
S000005485
UniProt:
Q12383
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All DBs
Position
XV:83834..85264
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AA seq
476 aa
AA seq
DB search
MLQDNNGPAVKRAKPSERLQCEYFMEKKKRRCGMTRSSQNLYCSEHLNLMKKAANSQVHN
KNGSEAEKERERVPCPLDPNHTVWADQLKKHLKKCNKTKLSHLNDDKPYYEPGYNGENGL
LSSSVKIDITAEHLVQSIELLYKVFEGESMDELPLRQLNNKLMSLKRFPQLPSNTKHAVQ
QSSLIENLVDAGAFERPESLNFIEFGCGRAEFSRYVSLYLLTQLTSLPAEHSGSNSNEFV
LIDRATNRMKFDKKIKDDFSEIKSNSPSKPISCPSIKRIKIDIRDLKMDPILKSTPGDDI
QYVCISKHLCGVATDLTLRCIGNSSILHGDDNNGCNPKLKAICIAMCCRHVCDYGDYVNR
SYVTSLVEKYRAHGSILTYETFFRVLTKLCSWGTCGRKPGTAITDIVNVVESFEGAEPYT
ITIKERENIGLMARRVIDEGRLVYVKEKFTEFNAELIRYVESDVSLENVAMLVYKK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagataataatgggcccgctgttaagagggcgaaaccctcagaaaggttgcaa
tgtgaatatttcatggaaaaaaagaaacgaagatgtgggatgaccaggagttctcagaac
ttgtattgttcagagcatctgaatttgatgaaaaaggcggctaattctcaagtgcataat
aagaatggcagtgaagcagagaaagaaagagaaagagtaccttgtccgctggatcctaac
catacggtttgggcagatcaattaaaaaagcatttgaaaaaatgcaacaagaccaaacta
agccatttaaacgatgataagccatactatgaaccgggctataacggagagaatggactg
ttatcgtcgtctgttaaaatagatattactgcggaacatttggtacaatctattgaattg
ctgtataaggtgtttgagggagaatccatggacgagctgcctttgagacaactgaacaat
aagcttatgtctctaaaacgattccctcaattgccttcgaatactaaacatgctgtacaa
cagtcttcactgatcgaaaacttagtggacgctggcgcatttgagaggccagaaagttta
aacttcattgagtttggatgtggcagggccgaattctcgcgctatgtcagtctgtacctt
ttaacacaattgacaagccttccagcggagcactcgggttcaaactcgaacgagttcgtg
ttgattgacagagcaactaataggatgaagttcgataaaaagataaaagacgatttttca
gaaataaagtcaaactcaccttccaaacctattagctgccccagcatcaaaaggataaag
atcgacattagggacttgaagatggatccgattttaaaatcgacacctggggacgatata
caatacgtgtgcatctcaaaacacctttgtggtgtagctacagatctaactttgaggtgt
ataggcaacagctcaattttacatggcgacgataacaacggatgcaaccccaaactaaag
gcaatttgtattgccatgtgctgcaggcatgtctgtgactacggcgactatgtcaaccgc
agttacgttacatcacttgttgaaaagtatagggcccatggctccatcttgacgtacgaa
acctttttccgcgttttaactaaactctgttcatggggtacctgcggaaggaaaccaggt
acggctattacagatatagtaaacgttgtcgaatcgtttgaaggggctgagccatataca
ataaccattaaagagagagaaaatattggattaatggctaggcgtgtaatcgacgagggc
aggttggtatatgtgaaagaaaagtttacagagtttaatgcggagctgataaggtacgta
gaatccgatgtttctttagagaacgttgctatgttagtttataagaaatag
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