Saccharomyces cerevisiae (budding yeast): YOR046C
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Entry
YOR046C CDS
T00005
Symbol
DBP5, RAT8
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
sce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
YOR046C (DBP5)
03015 mRNA surveillance pathway
YOR046C (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YOR046C (DBP5)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YOR046C (DBP5)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
YOR046C (DBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
AAA_22
DUF4246
Motif
Other DBs
NCBI-GeneID:
854211
NCBI-ProteinID:
NP_014689
SGD:
S000005572
UniProt:
P20449
Structure
PDB
PDBj
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All DBs
Position
XV:complement(414459..415907)
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AA seq
482 aa
AA seq
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MSDTKRDPADLLASLKIDNEKEDTSEVSTKETVKSQPEKTADSIKPAEKLVPKVEEKKTK
QEDSNLISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQE
RALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLE
VVQEMGKFTKITSQLIVPDSFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDE
ADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVN
VDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSIL
HGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATY
IHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYFGDIEMTRVPTDDWDEVEKIVKKVL
KD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacaaagagagatccggccgatttactagcttctttaaagattgataatgag
aaagaggatacaagtgaagtttcaacaaaagagactgttaagtcccaaccagaaaagact
gctgattcgatcaagcctgcagaaaaattagttccaaaagttgaggaaaaaaaaacaaaa
caggaggatagtaatttaatcagctcagaatatgaagttaaggtcaaacttgctgatatc
caggctgacccaaattctccattgtacagtgctaaatcttttgatgaattaggattagca
ccagaactactaaaggggatatatgctatgaaatttcaaaaaccatccaaaattcaagaa
agggcgctgccattattattacataatccgcctaggaacatgattgctcagtctcaatca
ggtacaggtaaaactgccgccttttctttaacgatgctaacaagagtaaacccagaagac
gcatctccacaggcaatttgcttagccccctccagagaactggccagacaaacactagaa
gtcgttcaggaaatgggtaagttcacaaaaataaccagtcagttaattgttcccgattct
tttgagaaaaacaagcaaattaatgctcaagtgattgttggtacgccgggcactgttctt
gacctaatgcgtagaaaattgatgcagctacagaaaattaaaatttttgttttggatgaa
gccgataacatgttggatcagcagggtctaggtgaccagtgtattcgtgttaagagattt
ttacccaaggatactcaacttgttttgtttagtgctacttttgccgatgcagttaggcag
tacgcaaagaagatcgttccaaatgctaatactttagaattacaaacaaatgaagttaat
gttgatgccatcaaacaactatacatggactgcaaaaacgaagcagataagtttgatgtt
ttaactgagctatatggtttaatgacaattggatcttccattatttttgttgcaaccaaa
aaaaccgcaaacgttttatatgggaaattgaaaagtgaaggtcatgaagtttctatcttg
catggtgatttacagacacaagaaagagacagattaatagacgacttcagagagggtaga
tccaaagttttgattactactaatgtcctggcccgtggtattgatattcctactgtctca
atggttgtcaactatgatcttccaacgcttgctaacggacaagcagatccagctacttac
attcacagaatcggtagaaccggtagattcggcagaaaaggtgttgccatttcctttgta
catgacaaaaattctttcaatattttatctgcaattcagaaatacttcggtgatatagaa
atgactcgtgttccaacggatgattgggatgaagtcgaaaaaatagttaagaaagtgtta
aaggattag
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