Saccharomyces cerevisiae (budding yeast): YOR250C
Help
Entry
YOR250C CDS
T00005
Symbol
CLP1
Name
(RefSeq) cleavage polyadenylation factor subunit CLP1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
YOR250C (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YOR250C (CLP1)
Enzymes [BR:
sce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
YOR250C (CLP1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
YOR250C (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_7
nSTAND3
AAA_16
CbiA
PduV-EutP
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
854424
NCBI-ProteinID:
NP_014893
SGD:
S000005776
UniProt:
Q08685
Structure
PDB
PDBj
LinkDB
All DBs
Position
XV:complement(800970..802307)
Genome browser
AA seq
445 aa
AA seq
DB search
MASLPGIDEHTTSEELITGDNEWHKLVIPKGSDWQIDLKAEGKLIVKVNSGIVEIFGTEL
AVDDEYTFQNWKFPIYAVEETELLWKCPDLTTNTITVKPNHTMKYIYNLHFMLEKIRMSN
FEGPRVVIVGGSQTGKTSLSRTLCSYALKFNAYQPLYINLDPQQPIFTVPGCISATPISD
ILDAQLPTWGQSLTSGATLLHNKQPMVKNFGLERINENKDLYLECISQLGQVVGQRLHLD
PQVRRSGCIVDTPSISQLDENLAELHHIIEKLNVNIMLVLCSETDPLWEKVKKTFGPELG
NNNIFFIPKLDGVSAVDDVYKRSLQRTSIREYFYGSLDTALSPYAIGVDYEDLTIWKPSN
VFDNEVGRVELFPVTITPSNLQHAIIAITFAERRADQATVIKSPILGFALITEVNEKRRK
LRVLLPVPGRLPSKAMILTSYRYLE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctacctggtattgatgagcatactacctctgaagaattgataactggtgat
aacgaatggcacaagttggttattcccaagggcagtgattggcaaattgatcttaaagca
gagggaaaactgatagtcaaggtaaactcgggcatagttgagatatttggcaccgagttg
gcagtagatgatgagtacacttttcagaactggaagtttcccatatacgctgtcgaagaa
acagaattattatggaaatgtcctgatttaactacgaatacaataactgtcaagcctaac
catactatgaaatatatttataatctacacttcatgttggagaagatacgaatgtctaac
tttgaaggccctcgagtggtgattgttggtggttcgcaaaccgggaagacttccctatcg
aggacactatgttcttacgctttgaaattcaacgcttaccaaccactatacatcaatctt
gaccctcaacagcccatttttactgttcctggatgcatatctgccaccccaatatcagat
atacttgatgcacaactacccacttggggtcagagtctcactagtggtgccacactacta
cataataagcagccaatggtgaaaaattttggcctggaaaggattaatgagaacaaagat
ctataccttgagtgtataagccagttaggtcaagtagtaggtcaaaggttacatttggat
cctcaagtcaggagatcagggtgcattgtcgatacgccatcaatatcacaactggatgaa
aatttggctgaactgcaccatatcattgagaaactcaatgttaacattatgctagtacta
tgttctgaaacggatcctctttgggagaaagtaaaaaagacatttggtccagaattggga
aataataatatttttttcattcctaaattggatggtgtatccgcagttgatgatgtatac
aaaagatccttgcagaggacatccataagagagtacttttacggctctcttgatacagcc
ttgagtccttatgctattggtgttgattatgaggatttaactatttggaaacctagcaat
gttttcgataacgaggtcggtagggtggaactgttccccgtcactataactccaagtaac
ctacagcacgctattatagccataacgttcgcagaaagaagggcagatcaggcaacagta
ataaaatcgcctattttaggattcgctttgattacagaagttaatgaaaaaaggcgtaaa
ttaagggttttactacctgtcccaggccgacttcccagcaaggcgatgattctaacttca
tatagatatttagagtaa
DBGET
integrated database retrieval system
