Saccharomyces cerevisiae (budding yeast): YPL022W
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Entry
YPL022W CDS
T00005
Symbol
RAD1, LPB9, RAD12
Name
(RefSeq) ssDNA endodeoxyribonuclease RAD1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03420
Nucleotide excision repair
sce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YPL022W (RAD1)
03460 Fanconi anemia pathway
YPL022W (RAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sce03032
]
YPL022W (RAD1)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YPL022W (RAD1)
DNA replication proteins [BR:
sce03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
YPL022W (RAD1)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
YPL022W (RAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
856085
NCBI-ProteinID:
NP_015303
SGD:
S000005943
UniProt:
P06777
LinkDB
All DBs
Position
XVI:506697..509999
Genome browser
AA seq
1100 aa
AA seq
DB search
MSQLFYQGDSDDELQEELTRQTTQASQSSKIKNEDEPDDSNHLNEVENEDSKVLDDDAVL
YPLIPNEPDDIETSKPNINDIRPVDIQLTLPLPFQQKVVENSLITEDALIIMGKGLGLLD
IVANLLHVLATPTSINGQLKRALVLVLNAKPIDNVRIKEALEELSWFSNTGKDDDDTAVE
SDDELFERPFNVVTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVL
NADSLRHNSNESFILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWP
RFRVEVSSCLNATNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALD
WWNMENVLDINFIRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVTSDAVDFFGEI
QLSLDANKPSVSRKYSESPWLLVDEAQLVISYAKKRIFYKNEYTLEENPKWEQLIHILHD
ISHERMTNHLQGPTLVACSDNLTCLELAKVLNASNKKRGVRQVLLNKLKWYRKQREETKK
LVKEVQSQDTFPENATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVF
EDHKLSEEIKKGSGDDLDDGQEENAANDSKIFEIQEQENEILIDDGDAEFDNGELEYVGD
LPQHITTHFNKDLWAEHCNEYEYVDRQDEILISTFKSLNDNCSLQEMMPSYIIMFEPDIS
FIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENANLSHHFET
NEDLSHYKNLAERKLKLSKLRKSNTRNAGGQQGFHNLTQDVVIVDTREFNASLPGLLYRY
GIRVIPCMLTVGDYVITPDICLERKSISDLIGSLQNNRLANQCKKMLKYYAYPTLLIEFD
EGQSFSLEPFSERRNYKNKDISTVHPISSKLSQDEIQLKLAKLVLRFPTLKIIWSSSPLQ
TVNIILELKLGREQPDPSNAVILGTNKVRSDFNSTAKGLKDGDNESKFKRLLNVPGVSKI
DYFNLRKKIKSFNKLQKLSWNEINELINDEDLTDRIYYFLRTEKEEQEQESTDENLESPG
KTTDDNALHDHHNDVPEAPV
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagttattttatcagggcgactctgatgatgagctccaggaggaacttacgagg
cagacaactcaagcatctcaaagttctaaaattaaaaatgaagatgaacccgacgactcc
aatcatcttaatgaggtggaaaatgaagatagcaaagttttagatgacgatgcagtgtta
taccctcttatacctaatgagccagatgacatagaaacgtctaagcccaatattaacgat
attaggccagttgatattcaattgactttaccattgccgtttcagcaaaaagtggtagag
aattcattaattactgaagatgcattaatcataatggggaaaggactaggattgcttgat
attgtggccaatttattgcatgttttagctacaccaacatccattaacggacaactaaag
cgagcgctcgtcctagtgttgaatgcaaaacctatagataatgtaagaatcaaggaggcc
ttagaagagctgtcgtggttctctaatactgggaaggacgacgacgatactgctgtcgag
agcgatgatgaactttttgaaaggccttttaacgtagttaccgcggactcgctgagcatt
gaaaagagaagaaagctatatatttctggcggaatcttgagcattacttctagaattctc
attgtggatctcttatccggcattgttcacccaaatagggttacgggtatgctggtattg
aatgcagactcacttcgacataattcgaatgaatcgtttatattagagatttacaggtct
aaaaatacttggggttttattaaagccttttctgaagcaccagagacgtttgtcatggaa
ttttcacccctcaggacgaaaatgaaagaattacggctaaagaacgttttgctatggccg
aggttcagggtagaggtctcttcctgtttgaatgccactaataagacgtcacacaataaa
gtcattgaagtcaaggtctccttaacaaattccatgtctcagatacagtttggcttgatg
gaatgtttgaaaaaatgtattgctgagttaagcagaaaaaatcctgaactagctctggac
tggtggaatatggaaaatgtcctggatataaactttatcaggtcaattgactcggtgatg
gtgccgaactggcaccgaatttcttatgaatcaaaacaactggttaaggatataagattc
ctacgccaccttttaaagatgctcgtaacttcagacgcagttgacttttttggagagatt
caattaagtttggatgccaataaaccgtcagtatcccgaaaatacagcgaatcaccgtgg
ctattggtcgatgaggcacaattagtcatatcgtatgcgaagaaaagaatattttacaaa
aatgaatatactttagaagaaaatccaaaatgggaacaacttattcatatattacatgat
atttcacatgagagaatgaccaatcaccttcaggggcctactttagttgcctgttccgac
aaccttacatgtttagaactagcaaaggtcttgaatgcctcaaacaaaaaaagaggagta
cgtcaagtgcttctgaataaattgaaatggtacagaaaacagagggaggaaacgaaaaaa
ttggtcaaagaagtgcaaagtcaggacacttttccagagaatgcaacattaaatgtaagc
tcgacattttccaaagaacaagtgaccacgaaaagaagaaggacaagaggtgcttcacaa
gttgcggccgttgaaaagctaaggaatgcaggtaccaatgtagatatggaggtggttttt
gaggatcataagttatctgaagaaattaagaagggaagcggtgatgatttggatgacggt
caggaagaaaatgccgcaaacgattcaaagatttttgaaatacaagaacaggaaaatgaa
atccttatcgatgatggggatgctgaatttgacaacggagaattagagtatgtgggcgac
cttccgcagcacatcacaacccatttcaataaggatttatgggcagaacattgcaacgag
tatgaatatgttgatcgtcaggacgaaattttaatctctacgtttaaaagtctcaatgac
aattgctcattgcaggagatgatgccctcttacattataatgtttgaaccagatatatcg
tttatcaggcagattgaagtttataaggccatagtgaaggatttgcaaccaaaagtatac
ttcatgtactacggtgaaagtattgaagagcaaagtcatttgactgctatcaagagagag
aaagatgctttcacaaagttgattagagagaatgcaaatctgtcccatcactttgaaacg
aatgaagatctttctcactacaaaaatttagctgaaaggaagttgaagctttcaaaatta
cgaaaatctaataccagaaatgcgggtgggcagcagggattccataatcttactcaggat
gtcgtcattgtggatacacgtgagtttaatgcctcattaccaggcttactctaccgatat
ggcataagggttattccttgtatgttgacagtcggcgattatgtgataactcctgatatt
tgtctcgaaagaaaatcgatttctgacttaattgggtcattacagaataacagattagcc
aaccaatgtaaaaaaatgttaaaatactatgcatatccgacactattgattgagtttgat
gaaggacagtcgttttctttagaaccttttagtgaacgtagaaattataagaataaagac
atatcaactgttcatcctatatcaagcaagttatcccaggatgaaattcagctaaaacta
gccaaattagtattgcggtttcccactttaaagattatatggtcttcctcacccctgcaa
actgtaaatataatcctagagttgaaattaggacgtgagcaacctgaccctagtaatgca
gttatattgggaacgaataaagttagatcggattttaatagcactgcaaagggcctgaag
gatggtgataacgagtctaaattcaagagactgttgaatgttcctggagtgtcaaaaatt
gattatttcaatctccgcaaaaagatcaagagcttcaataagcttcaaaagctttcatgg
aatgagattaatgaacttattaatgacgaagatttgacggatagaatatactacttcttg
agaacagaaaaagaagaacaagaacaagagtcaacagatgaaaatcttgaatctcctggt
aagaccactgatgataacgctttacatgatcatcataatgatgttcctgaagcacctgtg
taa
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