Saccharomyces cerevisiae (budding yeast): YPL119C
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Entry
YPL119C CDS
T00005
Symbol
DBP1, LPH8
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase DBP1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YPL119C (DBP1)
03041 Spliceosome [BR:
sce03041
]
YPL119C (DBP1)
03036 Chromosome and associated proteins [BR:
sce03036
]
YPL119C (DBP1)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YPL119C (DBP1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
YPL119C (DBP1)
mRNA cycle factors
Common to processing body (P body) and stress granule
YPL119C (DBP1)
Spliceosome [BR:
sce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
YPL119C (DBP1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
YPL119C (DBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
855984
NCBI-ProteinID:
NP_015206
SGD:
S000006040
UniProt:
P24784
LinkDB
All DBs
Position
XVI:complement(324411..326264)
Genome browser
AA seq
617 aa
AA seq
DB search
MADLPQKVSNLSINNKENGGGGGKSSYVPPHLRSRGKPSFERSTPKQEDKVTGGDFFRRA
GRQTGNNGGFFGFSKERNGGTSANYNRGGSSNYKSSGNRWVNGKHIPGPKNAKLEAELFG
VHDDPDYHSSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPV
QKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSA
LVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLND
LLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDI
QHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAEHKGLTLIFVET
KRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNV
THVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTF
LSDLSRQNSRGGRTRGGGGFFNSRNNGSRDYRKHGGNGSFGSTRPRNTGTSNWGSIGGGF
RNDNEKNGYGNSNASWW
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttgccacagaaggtatctaatttaagcatcaacaacaaagagaatggtggt
ggtggcggcaaatcatcttatgtcccaccgcacttgagaagtagaggaaaaccatcattc
gaaagaagtaccccaaaacaggaagataaggttacgggtggtgattttttcagacgtgct
ggaaggcaaactgggaacaatggcgggttttttggcttttctaaggaaagaaatggaggg
acgagtgcgaactataaccgcggaggcagctcaaattacaaatcatctggaaatagatgg
gtaaatggcaagcatataccggggcctaagaacgcgaaattagaagccgaactgtttggt
gtacacgacgatcccgattaccattcatctggtataaagtttgataattacgataatatt
cccgtagatgcatctggaaaagatgttcctgaacctatactagattttagttctccccct
ctggatgagctgttaatggaaaatatcaaacttgctagtttcaccaaacctactccagta
caaaaatattctattccaatagttaccaaaggtagggatttgatggcatgcgcacaaacg
ggctcaggtaagacaggtgggtttttgtttccgctcttcacggagctattcaggtctggg
ccctctccagtacccgagaaagcacagagcttttattctagaaagggatatccatctgct
ttagtacttgcaccaactagagaattggctacccaaatttttgaagaagcaagaaaattt
acgtatagatcttgggttaggccatgcgttgtttatggtggcgcgccaatcggtaaccag
atgagggaggttgaccgcggctgtgacttattggtggctacaccagggcggctgaatgac
ttattagaacgcggaaaagtttctttggctaatatcaaatacctggtattggatgaggct
gatagaatgctagatatgggattcgaaccccaaattcgccatatagttgaagaatgtgat
atgccctctgtggaaaatagacagaccttgatgttttccgccacattcccagtagatatc
cagcatttggcacgcgatttcttagataattatatttttttatcagtaggaagagtcggt
tccacctcagaaaatatcacgcaaagaatattatatgtcgatgacatggacaaaaagtct
gcgttgttagatttactgtctgcagagcataagggattgacattgatttttgttgaaacg
aaaagaatggcggatcaactcacagattttttgatcatgcaaaatttcaaagctacagcc
atacatggtgaccgcacacaggctgaacgtgaacgtgccttatctgctttcaaagctaac
gtagctgatatcctggtcgcaacagctgtagcagcgagaggtttggatataccgaatgtc
acacatgtcattaattatgatttgccctccgacatcgatgactacgttcacagaattggt
agaacaggccgtgctggtaacacaggcgtggctacttcattcttcaatagtaataatcag
aatattgtgaagggtttgatggaaattttaaatgaagcgaatcaagaagttcccacgttt
ttaagtgacctgtcaagacagaattcaagaggtggaagaactaggggaggaggaggtttt
ttcaatagtcgtaataacggttcaagagactaccgtaaacatggtggaaatggctcattt
gggagcacgaggccaaggaatactggaacatcaaattggggttcgattggaggtgggttt
agaaatgataatgagaaaaacggttacggaaatagcaacgcttcatggtggtaa
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