Saccharomyces cerevisiae (budding yeast): YPR178W
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Entry
YPR178W CDS
T00005
Symbol
PRP4, RNA4
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YPR178W (PRP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YPR178W (PRP4)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
YPR178W (PRP4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
eIF2A
WD40_like
Motif
Other DBs
NCBI-GeneID:
856307
NCBI-ProteinID:
NP_015504
SGD:
S000006382
UniProt:
P20053
Structure
PDB
PDBj
LinkDB
All DBs
Position
XVI:892332..893729
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AA seq
465 aa
AA seq
DB search
MSKYIALENLPVDLQHKGATQNESTADILKQLPHERLQAVLEKIPEEDLEVRRLLSILKK
PEVVENEDVQQRRIRLAEILMVDEIDLENINNMENINGEEVDEEDDEDFFTPATSELIFA
RRFLINYSLERSRKRLQKEMERHQKFNTRQELLSRRTELQRMANLELAGSQLVSTKPISA
VSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAED
GLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQEL
LLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPN
GYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLIN
VYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatatattgcacttgaaaatcttccggtagatttgcaacataaaggagctaca
caaaatgaaagcaccgctgatatactgaaacagttgccacatgaacgattacaagctgtc
ctggagaagataccagaagaagatcttgaggtgagacgattgctttcaattttaaagaag
ccggaagtagtggagaatgaagatgtacaacaaagaagaatacggttggctgaaatttta
atggttgatgaaattgatcttgagaacattaataacatggaaaacataaatggggaagaa
gtagacgaagaggacgatgaggacttcttcactccagcaacatctgagctcatttttgcg
agaagatttttgataaattattcacttgaaagatctcgaaagaggctacagaaagagatg
gaaagacatcaaaagttcaatacaagacaggaattactcagtcggcgtacagaattacag
cgtatggctaatttagagcttgctggctctcaattagtatctacgaagcctatttccgca
gtttctttatctaccgatgacatggttgtcgcaacgggaagctgggcaggtgatcttcag
gtattaaattctcaaacactgcagccattgacacaaaaactcgactctcatgtagggaaa
atcggagctatagattggcatcctgattcaaacaatcaaatgatttcatgcgcagaagac
gggctcatcaaaaactttcaatactcaaacgaagagggcggccttcgattattgggagat
cttgtgggacatgaaagacgtatttctgatgtgaaataccaccctagtggcaaatttata
ggtagtgcctctcatgatatgacttggagactttgggatgcgtcaacacatcaagaactg
ctgctacaagaaggccatgataagggagtgtttagtctgtcttttcaatgcgatggatct
cttgtttgtagcggtggcatggactcgctttcaatgctatgggatataagatccggaagt
aaggtgatgacactcgcaggacactcaaagcctatttacaccgtagcttggtcaccaaac
gggtatcaagtagccactggtggtggtgatggaatcattaatgtttgggacatcagaaaa
cgggatgaaggccaactaaatcaaatattggcgcatcgtaacatcgttacgcaggtaagg
ttttcaaaggaagacggcggaaagaaacttgtctcttgtggctatgataatttgatcaat
gtgtatagtagtgatacgtggttaaaaatgggaagtttagcaggccacactgataaaatt
attagcttggatatttcgaataattctcattttttagtgagcggcggatgggataggtct
atcaagctctggaattga
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