Saccharomyces cerevisiae (budding yeast): YPR189W
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Entry
YPR189W CDS
T00005
Symbol
SKI3, SKI5
Name
(RefSeq) SKI complex subunit tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPR189W (SKI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YPR189W (SKI3)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
YPR189W (SKI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_11
TPR_1
TPR_17
TPR_16
ANAPC3
TPR_9
TPR_12
HrpB1_HrpK
Alkyl_sulf_dimr
T7SS_EccA1_N
ARM_TT21_N
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
856319
NCBI-ProteinID:
NP_015515
SGD:
S000006393
UniProt:
P17883
Structure
PDB
PDBj
LinkDB
All DBs
Position
XVI:912664..916962
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AA seq
1432 aa
AA seq
DB search
MSDIKQLLKEAKQELTNRDYEETIEISEKVLKLDPDNYFAHIFLGKALSSLPASNNVSSN
RNLERATNHYVSAAKLVPDNLLAWKGLFLLFRTTEVVPDILSYDEYFDLCGQYADALLKQ
EQSQVELINDIKLLKKTHPDCQKAFYQHLKPGSLMAETIGRHLSTPQDALLNLIKILSNI
ETTEIGKTLSQNRLKLKASDPDYQIKLNSFSWEIIKNSEIDQLYNQLVNILADDQKRSEI
ENQWLEYRIKVLKSMPLDVKKDFFTKVKEMVEDMVLVNHQSLLAWQKYFEWTDYEDLDNM
DAPLIIKYFKKFPKDPLAMILYSWLSSKLSKYDIKSLESANKPPEGHKKTEKETDIKDVD
ETNEDEVKDRVEDEVKDRVEDEVKDQDEEAKEDEEEDLDDIEIGLLEEEVVTVLTENIVK
CKNNILAHRILCQYYLLTKEYEAALPYIKNGISLIAYNIKDLGVHLPLTKREFSLDLATV
YTYVDAPKDHNAALKLYDNILSGDFSNIQAKMGKGIIFIERKNWKDAMTLLTQVHEQSPN
NLEVLSELSWSKAHMGYMDEALAGLDTVIKGIKGMDLRSIDFRALNLWRQAKVYIMKHAS
INDAKQENVKCAFKLLIQSIKILDTFAPGFSTLGDIYCHYYKDHLRAFKCYFKAFDLDAG
DYTAAKYITETYASKPNWQAASSIASRLIKGEKAKAELRSNNWPFRVVGIAHLEKQEESD
SIEWFQSALRVDPNDVESWVGLGQAYHACGRIEASIKVFDKAIQLRPSHTFAQYFKAISL
CDVGEYLESLDILEKVCQEAATEESFQIGLVEVLMRCSLDLYSQGFLLKSVSIAKDTIER
IKIIISELKCENQQVWIYLSQVLRLFIWIESKVDTLPVESLVSIFENSQFSGSEEIDSVD
NIKIDTLLDSTTDDNVSIACKFLILASKYSVSDQKFTDIAGTVRASYWYNIGISELTAFI
TLKEPQYRDAAIFAFKKSIQLQSNTSETWIGLGIATMDINFRVSQHCFIKATALEPKATN
TWFNLAMLGLKKKDTEFAQQVLNKLQSLAPQDSSPWLGMALILEEQGDIIGSSKLFAHSF
ILSNGRSKAAQFMYAKNVLENHINNGDDERDIETVEKLTTASIALEQFFKKSPDSQFALQ
CALLTLERLHHYENANELANRLIGILEKKFEKTQDERELFNFAIIKGQFARIHLGLGNFE
LSIENADLSQGIISESSDEKSMKTKISNHICLGLSYFFLNDFDQTLNQFQELLSISKDSK
HLVVLIAKVLYDVGESDTKEIALQELTEYIATSGADLLVTLTIAAMSILDDKREDLSIIL
EELKALPLSKQIIDKHKDAPYLIEEITKRLYRNDTGKQVWQRSAYFFPNNLKVWERLDKN
IQRRIASNGQNKVTAEEMSKLYCESKNLRSIQRGMFLCPWNVTAVKALNECF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaaacagctattgaaggaagccaaacaagaattgacaaatcgtgactat
gaagagaccatcgaaatatcggaaaaggttcttaaactagatcccgataattatttcgca
catatttttctagggaaagcactttcgagtcttccagctagtaataatgtcagttcaaat
cggaacctggagagagctactaatcattacgtgtccgctgccaaattagttcctgataac
cttttagcgtggaaaggactttttctcttatttagaaccactgaggttgtcccagacata
ctttcgtatgatgaatattttgacctgtgtggccaatatgcagacgcacttttaaagcag
gaacagtctcaagtagaactaataaatgacataaaattactaaagaaaacgcatccagat
tgtcaaaaagccttttatcagcatttgaaacctgggtcgctaatggcggaaactattggt
cgtcatctatctacaccccaggacgctttattaaatcttataaagatactgtctaatatt
gaaacaacggaaataggtaagacccttagtcagaacaggttaaaactaaaagctagtgat
cctgattatcaaattaaactaaattcattctcctgggaaataattaaaaattcagaaatt
gatcagttatacaaccagttggtaaatattctcgctgacgatcaaaagagaagtgaaatt
gagaaccagtggttagaatatagaatcaaagtgctaaaatcaatgccgctggatgtaaaa
aaagattttttcacgaaagttaaggaaatggtcgaggatatggttcttgtgaatcatcaa
tctttgcttgcatggcaaaagtatttcgaatggacagattacgaagatctggacaacatg
gatgccccattgataataaagtactttaagaaatttcctaaagatccattggccatgatc
ctctattcctggctttcctcaaaactatcgaaatatgatattaaaagtttggaatcggct
aataaaccacctgaaggccataaaaagacggagaaggaaacagatattaaggatgtagat
gagacaaatgaagatgaagttaaagatcgcgttgaagatgaagttaaagatcgtgttgaa
gatgaagtcaaagatcaagatgaggaggcaaaggaagatgaagaagaagaccttgatgat
atagaaattggtttattagaggaagaggttgtcactgtattgacggagaatatcgtaaaa
tgtaaaaataatatcttagcgcatcgcattctttgtcaatattacctactgaccaaggag
tatgaggcagctttaccatacatcaaaaatggtatttctttaattgcctataatataaag
gacctgggggtacatttgccattaacaaaaagagaattttctctggatttggctaccgtt
tatacatatgtcgatgccccaaaggaccacaatgctgcattaaagttatatgataacatt
ttatccggtgattttagtaatatacaagcaaaaatgggcaaaggtataatttttattgaa
aggaaaaattggaaggatgctatgacattactaacacaggtgcatgaacaatcgcctaat
aatctggaagttttatctgaactgtcatggagtaaagcccatatgggttatatggacgag
gcattagctggcttagatactgtcatcaagggtatcaaaggtatggatttacgttcgata
gatttcagagcattaaacttatggaggcaagccaaagtttacattatgaagcatgcttcc
attaacgatgctaaacaggaaaacgtcaagtgcgcattcaaattactcattcagagtatt
aaaatattggacacttttgctcccggattttcgacactgggcgatatttattgccactat
tataaagaccatttgagggccttcaaatgttatttcaaagctttcgatctggatgcgggg
gattacacagcagcgaagtatattaccgaaacttatgcaagcaagcccaattggcaagct
gcttcttccatcgcttcaagattaattaaaggtgaaaaagcaaaggcagaactgcgctca
aataactggccctttagggtcgtagggattgctcatttggaaaagcaagaagaaagtgat
tctattgagtggtttcaatctgctttacgtgttgatccaaatgatgtagagtcatgggtg
ggcctgggacaagcataccacgcgtgtggtcgtatagaagcatctatcaaagtttttgac
aaggcaattcaattaaggccctctcatacttttgcccaatactttaaagctatttctcta
tgtgacgtaggtgaatatcttgaaagtttagacattctggaaaaggtatgtcaagaagcc
gctacagaagagtcattccaaattggtttagtggaagtgcttatgagatgttccttggat
ttatattcgcaagggttcttgctcaaatcagtttcaattgcaaaggacactattgaacgg
atcaagataattatcagtgaattaaaatgtgagaaccaacaggtttggatctacctttca
caagtactgagattatttatttggatagagtcaaaggttgatactttacctgttgaatca
ctagtatcaatttttgaaaattctcaattttctggtagtgaagaaattgattctgtcgac
aatatcaaaatcgatactttactcgatagcactactgatgataatgtgtccattgcgtgc
aagtttttgatcttagcttcaaaatatagtgtttcggatcaaaaatttacagatatagca
ggaacggtcagggcctcatactggtataatataggtatctcagagcttactgctttcata
acattgaaagaaccgcagtatagagatgctgctatttttgcttttaagaaatccattcaa
ttacagtctaatacaagtgaaacttggattggtctagggatagccactatggacatcaac
tttcgtgtctctcaacattgctttattaaagcaactgctttggaaccgaaggcgacaaat
acatggttcaacttggctatgctaggtttaaagaaaaaggatactgaatttgctcaacag
gttctgaataaattacaaagccttgccccacaagattcgtcaccttggctaggtatggcc
ttgattcttgaggaacaaggagacattatcggaagttctaaactttttgcacactccttc
atattatctaatggaaggtcaaaggctgcgcaatttatgtatgctaaaaatgtccttgag
aatcacattaataatggtgacgatgaaagagatattgagacagtggaaaaactaaccact
gcttcaatagctttagagcagtttttcaaaaaaagtcctgatagtcaatttgctcttcaa
tgtgctcttctaactcttgaaaggttacatcactatgaaaatgcaaacgaactggctaat
cggttgataggcattttggaaaaaaagtttgagaaaactcaagatgaaagagaactgttt
aattttgcgataattaaaggacaattcgctcgtattcacttaggtttaggaaatttcgaa
ctctctattgaaaacgctgatctttctcaaggtattatatctgaatcgagcgacgaaaaa
tcaatgaaaaccaaaatatccaatcacatttgcttaggattaagttatttcttcttaaac
gactttgatcagactttgaaccaattccaagaactgctaagcatttcaaaggattctaag
cacctagttgttttaattgcgaaggtgctttatgatgtaggtgaatctgacacaaaggaa
attgctttacaggaactaacagaatatatagccacaagcggcgcagacttgttagtaaca
ctaacgattgcagctatgtcaattctagacgataagcgtgaagatttaagcattatttta
gaagaattgaaagctttgccattatccaaacaaataatagataagcacaaagacgcacca
tatctgatagaagaaattactaagagactttatcgtaacgataccggtaaacaagtatgg
caaaggagtgcgtactttttccctaataacctcaaggtttgggagagattagataagaat
attcaacgaagaatagcttctaatggacaaaataaagttactgcggaggagatgagtaaa
ctatattgtgagagtaagaatttgagaagcatacaaagaggtatgtttttgtgcccttgg
aacgttactgcagtgaaggcgctaaacgaatgtttctaa
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