Sphingobacterium cellulitidis: ACF3OC_08695
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Entry
ACF3OC_08695 CDS
T11786
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
scel Sphingobacterium cellulitidis
Pathway
scel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACF3OC_08695 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scel03019
]
ACF3OC_08695 (rny)
Messenger RNA biogenesis [BR:
scel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACF3OC_08695 (rny)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
Sequestin
KH_NusA_2nd
DUF4954
KH_2
MctB
Motif
Other DBs
NCBI-ProteinID:
XID73715
LinkDB
All DBs
Position
1970365..1971924
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AA seq
519 aa
AA seq
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MELSTTISIIISLVVGVFIGRYLLQMLFKKQEQSANDKAAQIVKDAEQQAEHIKKQRQLE
AKEKFLQLKAEHEKEVSQKNNTISQKENTIRQKEQSMNQKLENLNREKQELDSKTKKLDQ
MIEFNDKKKDEVEQLKGQHIKQLESIAGLSADEAKEQLVNSLREEARSQAIMQIKDIVDE
AKLTASKEAKKVVIQTIQRTATESAIENTVSIFNIENDEIKGRIIGREGRNIRALEAATG
VEIIVDDTPEAIILSGFDPVRREIARLSLHRLVTDGRIHPARIEEVVAKTRTQIEDEIVE
IGERTVIDLGIHGLHPELIRMVGRMRYRSSYGQNLLQHSREVANFAATMAAELGLNVKHA
KRAGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPDVCNAIGAHHDEIEMTSMISPIVQ
ACDAISGARPGARREVVESYIKRLKELEDLALSYPGVEKTFAIQAGRELRVVVESEKVSD
AQAEILAADISNRIQTEMTYPGQIKVTVIRETRSVSYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagttatcaactactatatcaataataatttcactggttgttggtgtttttattggg
cgatatcttttacagatgttgttcaagaagcaggagcaatcggcgaatgataaggcagcc
caaattgtaaaggatgccgagcagcaagcggaacatatcaagaagcagcgtcaattggaa
gcgaaagagaagtttttacaattgaaagcagagcatgaaaaggaagtaagccaaaagaat
aatactatatctcagaaagagaataccatccgtcagaaggaacaatcgatgaaccagaag
ttggaaaatctaaaccgcgagaagcaggagttagatagtaagactaagaaattggatcag
atgattgagttcaacgacaagaaaaaggatgaagttgaacaattaaaaggtcagcatatc
aagcaattagagagtattgcaggattgtcggctgatgaagctaaagaacaattagtaaac
tcattacgtgaggaagctcgttctcaggcgatcatgcaaatcaaagatattgttgatgag
gcgaaattaacagcttcaaaagaagcgaagaaagtcgttattcaaacgattcaacgtacg
gcgacagaatcggcgattgaaaatacagtttccattttcaatattgagaatgatgagatc
aaaggacgtatcattggtcgtgaaggacgtaatattagagctttagaagcggcgacaggg
gttgaaatcattgttgatgatacgccggaagcgattattctttcgggattcgatccagta
cgtcgtgagattgcgagattatccttacaccgattggttacagatggtcgtattcaccca
gctcgtattgaggaagttgttgcaaaaacacgcactcaaatcgaggatgagattgtagag
atcggtgagcgtacggttatcgatttaggaattcatggtttacatccggaattgattcgt
atggtaggaagaatgagatatcgttcgtcttatggtcagaatttgttacaacactcacgt
gaggttgcgaattttgcggctacaatggctgcggaattaggattaaatgttaagcatgct
aagcgcgcggggctgttgcacgatatcgggaaagtgcccgatgacaatccagaattgcca
cacgcaattttagggatgcagttagctgagaaatacaaggagcatccagatgtttgtaat
gcaattggagcccaccacgatgaaattgagatgacttccatgatttcacctatcgtccag
gcatgtgatgctatttcaggagcacgcccaggcgcaagacgtgaagtggtagaaagttat
atcaagcgattgaaagaactagaagatctagctttatcgtatcctggagtagagaaaact
tttgctattcaagcaggacgtgaattacgtgtcgttgttgaaagtgaaaaagtatcagat
gcacaggcagaaattttagcagcagatatttcaaatcgtattcaaacggaaatgacttat
ccaggtcaaatcaaagtgaccgtaattagagaaacgagatccgtttcttatgctaaataa
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