Squalius cephalus (European chub): 307144571
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Entry
307144571 CDS
T11930
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
scep Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
scep04082
Neuroactive ligand signaling
scep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307144571 (gabra6b)
04082 Neuroactive ligand signaling
307144571 (gabra6b)
04519 Cadherin signaling
307144571 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307144571 (gabra6b)
Ion channels [BR:
scep04040
]
Ligand-gated channels
GABA-A
307144571 (gabra6b)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
307144571
NCBI-ProteinID:
XP_079703167
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Position
17:complement(32523292..32558995)
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AA seq
443 aa
AA seq
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MAWIRTCFFLSCVGQVLANPPTETRIYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTD
IFVTSFGPVSDVEMEYTMDVFFRQTWIDDRLKFEGPIEILRLNNLMVSNIWTPDTFFRNG
KRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPM
SEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMG
FFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFSTLQANKELRRANMACAAATAAARSDGEVVSNPL
DPGGVLKKRLNSLSQRDAPDRFSRPPQCDFHQHGSTFPANNMLIGTSIIDKYSRILFPLS
FGAFNLVYWIVYLTKDTMESREV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatacgcacatgttttttcctgtcttgtgttgggcaggtgttggcaaatcca
ccgactgagacaaggatttatttggataacattacgcgcattttggataggttgttagat
ggatatgacaacagactccgacctggttttggaggtcctgtcacagaggttaaaacggac
atatttgtcaccagctttggtcctgtttctgatgtggaaatggaatacacaatggatgtg
ttttttcggcaaacatggattgatgaccggctgaaatttgagggccccattgagattctg
cgtctcaacaacctaatggtcagcaatatctggacaccggacactttcttccgaaatggc
aaacgttctatttcgcacaacatgaccactcccaacaagctgttccgcatcatgcagaac
ggaactattctgtacaccatgaggttaaccatcaatgcagagtgccccatgcgattgata
aatttcccaatggatggacattcatgccctttgaaatttggcagctatgcctatccaatg
agtgagattgtttacacatggaagaaaggaccattattttcagtggaagttcctcaagag
agttccagtctactacagtatgatctcattggacagacagtgtctagtgagaggttgaag
tcaaacacaggtgaatacatagtcatgacggtgtacttccacctgcaaaggaaaatgggt
ttcttcttgatccagacatacatcccttgcattatgactgtgatcctagcacaggtctca
ttctggattgacaaagagtcagtacctgccagaactgtgtttggcatcaccacagtgcta
accatgaccacgctgagcattagcgcccgccattcgttaccaaaggtctcctatgccacc
gccatggactggttcatcgctgtctgcttcgcatttgtcttttctgccctgatcgagttt
gctgctgtcaactatttctccaccttgcaggccaataaggaacttcggcgggccaacatg
gcctgtgctgcggccacagcagcggccagaagtgatggagaagttgtttcgaatcctcta
gaccctggaggtgtgttgaagaaaaggctgaactccctctcccaaagagatgctcctgac
aggttctccaggccacctcagtgtgatttccatcagcatggttccactttccctgccaac
aacatgctgataggaactagtattattgacaagtactcacgcatcctctttcctctgtcc
tttggggccttcaacttggtctactggattgtctatctcaccaaagacactatggagtcc
agggaagtgtaa
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