KEGG   Squalius cephalus (European chub): 307145176
Entry
307145176         CDS       T11930                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
scep  Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:scep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scep03400]
    307145176 (helq)
Enzymes [BR:scep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     307145176 (helq)
DNA repair and recombination proteins [BR:scep03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    307145176 (helq)
SSDB
Other DBs
NCBI-GeneID: 307145176
NCBI-ProteinID: XP_079704168
LinkDB
Position
17:<14268536..14276310
AA seq 1009 aa
MYTDNYIHEIVVKRNPSSSRKRSRDGIRSHITPAKKRSSFTSTKCTSGEEHNCAQDMTEN
KGTELCCSDNEDLFEGYDSIVCDSSFLAKLEDVELQMRQCHDQQTPNLCEDYLSDSILED
FRDSPLRALPSSQLEFHKAVTTPHKSPSRGAHNTSTPDLINPRPAVNHADLNVNKPPSKA
RRSMKDHLKKVLIDNAATSSTVSKTVQQKEAVMTEEMSFAIQTMESISAEGDLGPFFGLP
SKVKDLILRFKGIQDLYEWQKTCLSLDSVQQRRNLIYSLPTSGGKTLVAEILIFKELLCR
KKDVLLILPYISLVQEKVRGLAGFGIELDFMVEEYAGSKGKFPPVKRRNKNSLYITTIEK
GHSLVNSLIENDRLDNIGLVVVDELHMLGDGSRGAILEMTLSKILYMSKSTQIIGMSATL
GNVGDLQTFLNAETYTNDFRPVELKEYVKIKDSIYEVDPKEETCFSFSRLLDFKYSSGLQ
KMDPDHIIALATEVIPQLSCLIFCATKKNCENLAGMICKYLNKEFLKHKQAEKATLLGEL
KSSGNGSLCPVLQKTVPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLP
ARRVILRSPYVAAEFLKRSQYKQMVGRAGRAGIDARGESILILQDKDINMAKELLSAPME
KCYSNLLHDGGRGLLSLVLSLIGLKITTTVEQVRDFMKGTLLSVQEAQVSPERSLWDLTV
ESIETLKQKSLIEASADVHNETILQITRLGRATFKGSVDLNYCDLLYRDLSKGLEGLLLN
SFLHLVYLVTPYDMVHQCKPDWMIYFRQFTNLSAAEQKMATAVGVPESFVARKAAGQSVR
KSVDIVVVNRLYLALVLYSLLKETNLWNVSDRYQLTRGFVQTLLSSASAFGSSVLHFTEE
LEEFWAYKSLLLELTRRLTYCVQAELIPLMEVAGVMEHRAKQLYNAGYKTLAHLANADPQ
ILVQTIENLFKRQANQIIASAKMLIKEKAEALQEEVDDLLMLPSDLPSL
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtatactgacaactacatacacgaaattgtggtaaaacgcaacccttcgtcctcaaga
aaaagatcaagggatggcataagaagtcacatcactccagccaagaaacggtccagtttc
acgtcaacaaaatgcacttccggtgaagaacacaattgtgctcaagacatgactgagaat
aaaggcacagagctgtgctgcagtgacaatgaggacttatttgagggctatgacagcatt
gtgtgtgacagctcctttctggctaagcttgaagatgtggagctccaaatgaggcagtgt
catgatcagcagactccaaacctctgtgaggattatctttcagactctatcttagaggat
ttcagagactcaccactgagggctttacctagctctcaacttgaatttcataaagctgtc
acaaccccacacaaaagcccttccaggggtgcacataacacctctacccctgatttgatt
aatcccaggccagctgtcaatcatgcagatctcaatgtcaacaagccaccctcaaaagcc
agaagaagtatgaaagatcatcttaagaaagtactgatagataatgcagcaacatccagc
acagtctccaagacagtacaacaaaaggaagctgtgatgactgaagaaatgagttttgct
attcagaccatggagtccatatcagctgagggggacctgggccctttttttggtctccca
tccaaagttaaagatcttattttgaggttcaagggaatccaggacttgtatgagtggcag
aaaacgtgtttgagcctggattcggtgcaacaaaggagaaatctaatttattctttacca
acaagtggtggaaagactctagtggcagagattctcatatttaaagagctcttgtgtaga
aagaaagatgtcctgcttattttgccatacatatccttggttcaggaaaaggttcgaggg
ttggctggctttggaattgagttggacttcatggtcgaggagtatgctggcagtaaaggg
aagtttcctccagtcaagagaagaaataaaaactctctgtacatcacaaccattgagaaa
ggacacagtcttgtcaattcactgattgaaaatgaccgtctcgacaatataggcctggtt
gttgtggatgagctccatatgcttggtgatgggagcaggggggcaattcttgaaatgact
ttgtcaaagattctgtacatgagcaagtcaactcaaattattggtatgagtgcaacacta
ggcaatgtgggagatcttcagacctttctgaatgctgaaacctacaccaatgactttcga
cctgttgagctgaaagagtatgtaaaaataaaggacagcatatatgaagttgacccaaag
gaagagacatgcttcagtttctcacgactcctggatttcaagtactccagtggattgcag
aagatggaccctgaccacatcatagccctggccaccgaagtcatcccacaactgtcctgc
ctcattttctgcgctaccaagaagaactgcgagaatctagctggaatgatctgcaagtat
ttaaataaggagtttctgaaacacaagcaggcagagaaagccacacttctgggtgaactg
aagagcagtgggaatggatccttgtgtcctgtgctgcagaagactgtgccctttggcctg
gcctaccaccacagtggactgaccagtgatgagaggaagctggtggaagaggcctattcc
tcaggggtgctctgcctcctcacctgcacctctactcttgctgctggcatcaacctccct
gcacgcagggtgattttaaggtccccatatgtagctgcagagtttttaaagagaagtcag
tacaaacagatggtgggcagagcaggacgagcgggtattgatgccaggggtgagagtatc
cttatccttcaggacaaagatataaacatggccaaagaactattgtctgcaccgatggag
aagtgttatagtaacctgctgcacgatggagggaggggcctcctcagtctcgtcctgtca
ctcattggcctgaaaataactacaactgtagaacaagtgagggatttcatgaaaggcaca
ctgcttagtgtgcaagaggctcaggtcagtccagagaggagtttgtgggatcttacagtg
gagtccatagagacattgaagcagaagagcctcattgaagcctctgctgatgtacataat
gaaaccattctccaaatcaccaggcttgggagagcaacattcaaaggttcagttgacctt
aactactgcgatctgctgtaccgagacttatcgaaggggctggagggtttactcctcaat
agttttcttcacttagtgtatctggttactccatatgacatggtgcatcaatgcaagcca
gattggatgatctacttcagacagtttacaaatttgtcggctgctgagcagaagatggcc
actgcagttggagtgcctgaaagttttgtggctagaaaggcggcgggacagagcgtgagg
aagtctgtggacattgtggtagtgaataggttgtatctggccctagtgctgtactcccta
ctgaaggagacaaacctgtggaacgtgtctgataggtaccagctgactagaggctttgtt
cagacgctcctcagctcagcttctgcctttgggtcctccgtgctgcacttcactgaggag
ctggaggagttttgggcctataagtctcttctcttagagctgacccgtagattgacttac
tgtgtgcaggctgagctcattccactcatggaggtggctggagtaatggagcatcgtgct
aaacagctatataacgctggttacaagacactggcgcatcttgccaacgcagatccacaa
attctggtccaaactattgaaaacctcttcaagagacaagccaatcaaattattgcatca
gcaaaaatgttaataaaagagaaagcagaggccttgcaggaggaggtggatgacctgctt
atgctgccatctgatctcccatctttgtaa

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