Squalius cephalus (European chub): 307145182
Help
Entry
307145182 CDS
T11930
Symbol
pde6b
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta isoform 1
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00230
Purine metabolism
scep01100
Metabolic pathways
scep04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
307145182 (pde6b)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
307145182 (pde6b)
Enzymes [BR:
scep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
307145182 (pde6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
GAF_3
DUF8593
Motif
Other DBs
NCBI-GeneID:
307145182
NCBI-ProteinID:
XP_079704185
LinkDB
All DBs
Position
17:14813619..14830983
Genome browser
AA seq
854 aa
AA seq
DB search
MSVKKEDVEKFLDGNPDFARSYFDKKLKPGAVASIMQIPESKVDVDSFKAISSIEEGAMF
YDLITDMQENVNMEKVIFKILQRISAMIHADRCSLFMYRQRNGIAELATRLFNVNKDSEL
DDCVVAPDSEIVFPLDIGIVGHVAQTKKTVNVKDVTQDSHFSTFVDELTEYTTRNILATP
IMNGKDIVAVIMAVNKTNGPYFTDEDEDLFLKYMKVASLNLKIFHLSYLHNCETRKGQLL
LWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDIWPVLMGEQPP
YSGPVTPDGREVIFYKVIDYILHGKEDIKVIPNPTPDHWALSSGLPTYVAENGLICNIMN
AASEEMFSFQTEALDSSGWTIKNVLCLPIVNKKEEIVGVATFYNRKDGKPFDDHDEQLME
ALTQFLGWSALNTDTYDKMNKLENRKDIAQDMVLYHVKCRDDEIQNILKTRQYFGKEPVD
CEEDELLEILKKELPGPKKFEIYAFHFADFDCTELELVMCGIQMYYEVGVVRKFQIPQEV
LVRFMYSVSKGYRKITYHNWRHGFNVGQTMFTLLTTGKLKRYYSDLEVMAMITAGFLHDI
DHRGTNNLYQVKSGNPLAKLHGSSILERHHLDFGKFLLGDETLNIFQNLNRRQTEHVFHL
IDIAIIATDLALYFKKRTMFQKIVDLSETYEEEKKWVDFMSLETTRKEIVMAMMMTACDL
SAITKPWEVQSKVALSVAAEFWEQGDLERTVLEQQPIPMMDRNKAAELPKLQCGFIDFVC
TFVYKEFSRFHKDIQPMYDGILNNRMNWKARQEEYESKLKELEEATKAKQEAAANNAAKS
NSTSGSGSKTCSIC
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaaaaggaagacgtggagaagttcctggatggaaatccagattttgccagg
agctattttgacaaaaagctcaaacctggtgccgtggcctcgatcatgcaaataccggag
tcgaaagtggatgtggacagttttaaggccataagctcgatagaagagggagcgatgttc
tacgatctcattacagacatgcaggagaacgtcaatatggagaaggtgatttttaagatt
ctgcagaggatcagcgctatgatccatgccgaccgatgtagcctcttcatgtatcgacaa
cggaacggcatcgccgagctggctacgcgtctcttcaacgttaataaagattctgagctc
gatgactgtgtggtggctccagactctgagatcgtcttccctctggacatcggtatagta
ggacatgtggctcaaaccaagaagactgtcaatgtgaaggatgttacacaggatagtcac
ttcagcacattcgttgacgaacttactgaatacaccacgcgcaacatcttggccacgccc
attatgaacggcaaggacatagtagccgtcatcatggcagtcaacaagactaatggaccc
tatttcacagatgaagatgaggatctttttttaaagtatatgaaagttgcctctctgaac
ctgaagatttttcatctgagctaccttcataactgtgaaacacgtaaaggacagctgctg
ttgtggtctgctaacaaggtgtttgaagagctcacagacattgaacgacagtttcacaaa
gctttgtacacagtgcgagcctacctcaactgtgacaggtactctgtgggcctgctggac
atgaccaaggaaaaggagttctttgatatttggccagtgttgatgggagagcagccacct
tattcgggccctgtaactccagacggaagagaagtaattttctacaaagttattgattat
atattgcacggaaaagaggacatcaaggtcataccaaatccaactccagatcattgggct
ttgtctagtggattacccacatatgtagcagaaaatggattgatttgcaacatcatgaat
gcagcatcagaggaaatgttcagctttcagacggaagctctggatagcagtggatggacc
ataaagaatgtgctgtgtctgccaattgtcaacaaaaaagaagaaattgttggtgttgca
actttctacaacaggaaggatggcaaaccatttgatgaccatgatgaacaactcatggag
gctttgacacagtttctgggctggtcggccctcaacacggacacctacgacaaaatgaat
aagctggagaacaggaaggacattgctcaggacatggtgctttaccatgtcaaatgtcga
gatgatgagattcaaaatatccttaaaacaagacaatattttggcaaagagccagttgac
tgtgaggaggacgagcttttggagattctgaaaaaagagctgcctggcccaaaaaagttt
gagatctacgccttccattttgcagactttgactgcactgaactggagcttgtaatgtgt
gggatccagatgtactatgaagttggggtggttagaaagtttcagatccctcaggaggtt
ttagtgagattcatgtactcagtcagcaaaggctacaggaaaatcacctaccacaactgg
cgccatggcttcaatgttgggcaaaccatgttcactttactcacgacagggaaactgaag
aggtattactcagatttggaggtgatggccatgatcactgccggcttcctgcatgatatc
gaccacagaggcacaaataatctctaccaagtgaagtccggaaatcctctagccaagctg
catggatcctccattctagagaggcatcacttggattttggcaaattcttgctaggcgat
gagacattaaacatcttccaaaacctcaacagaagacaaacagagcatgtcttccacctc
attgatattgccattatcgcaactgatcttgccttgtacttcaaaaagaggacaatgttc
cagaaaattgtggatctctctgagacatatgaagaggagaaaaaatgggtggacttcatg
tcccttgaaacgacaaggaaagaaattgtaatggcgatgatgatgacagcgtgtgacctc
tcagctatcacgaagccatgggaggtgcagagcaaggttgccctctctgtagcagctgaa
ttctgggagcagggtgatcttgagaggactgtgcttgagcaacagcccatccccatgatg
gacaggaacaaagctgcagagctgccaaagcttcagtgtggttttatcgactttgtctgt
acttttgtctacaaggagttctctcgtttccacaaggacatccagccaatgtatgatggc
attctgaacaaccggatgaattggaaagcgaggcaggaggaatatgagtcgaaactaaag
gaattggaggaggcaactaaagccaaacaggaagcagctgccaacaacgctgcaaagtcc
aacagcaccagtggatcagggtccaagacctgctccatctgctag
DBGET
integrated database retrieval system
