Squalius cephalus (European chub): 307145650
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Entry
307145650 CDS
T11930
Symbol
LOC307145650
Name
(RefSeq) GPI transamidase component PIG-T-like
KO
K05292
GPI-anchor transamidase subunit T
Organism
scep Squalius cephalus (European chub)
Pathway
scep00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
scep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
307145650 (LOC307145650)
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GFIT
Motif
Pfam:
Gpi16
Cnd3
Motif
Other DBs
NCBI-GeneID:
307145650
NCBI-ProteinID:
XP_079705138
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All DBs
Position
18:complement(14279609..14291759)
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AA seq
639 aa
AA seq
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MAAHRCGLSLVIILVVSCLAHPSSCDTLEKSNDNTGEKQSVSDALREVNADESIAGEKIN
ERQWQSTDVELDRSDGTKDSESFRLAPAKDQFEEELVIRPLHSGDIYASFQFRTLWDTDF
LQEGQKVSHYRLFPKSLGQVLSKFSVRELHISFTQGFWRTMQWGQPFIPSPPGAELWVWF
HHTVSDVDGNWKELTNVLSGIFCASLNFIDLTNTVQPSASFKPLGLGNATDHRFLRYATL
PREIVCTENLTPWKKLLPCGSKAGLAVLMKSEKLFHSSFHSQAVHIRPVCQDEHCTNKAW
ELRQTLNVVFDLYTSGQGKKEWSLFKMFSRTLTEACPLASSSKVYVDITDNPEGELFELS
PATPLLSQAVVLGDRRTYSVYDLTRAETFGQSRSLNLLLRWKGDSGDMLRPLLHAERYVA
GFGLQTGEIHTVIYNNHPYRAFPVLLMDSVPWYLQLYIHTLTVTSKSRDNKPSYIHYQPA
KDRHRPHLLEMLIQLPPHSMTEVTVQFERALLKWTEYTPDPNHGFYVGSSVVSALVPSMV
AMNTNFTQDQPLFSSFVPVKEESSYFVRVYTEPLLVNLPTPDFSMPYNVICLTCTVVAVG
YGSFYNLLTRTFQVDEPSPPLAKRLANLVRRIRGVPLLT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacacaggtgcggtttgtctctagtaatcattttggttgtttcttgtttagct
caccccagtagctgtgacacgcttgaaaaatcaaacgacaacacaggagaaaaacagagc
gtatcagacgctctgcgagaagtgaatgccgatgaaagcatcgctggagagaaaattaat
gaaaggcaatggcagtcgactgatgttgagctggacagaagcgatggtacgaaagacagc
gagtcttttagactagcaccggcgaaagatcagtttgaggaggagctggtcatccggccc
ctgcactccggggacatttatgccagcttccagttccgcacgctatgggatactgacttc
ctgcaagagggacagaaagtttctcactaccggctgttccccaaatccctcggccaagtg
ctgtccaagttttcagtgcgagagctgcacatctccttcacgcagggcttctggaggacc
atgcagtgggggcagcccttcatcccctctccacctggagcagagctgtgggtctggttc
catcacacagtcagcgatgtggatggaaactggaaggagcttaccaacgtcctctctgga
atcttctgtgcgtctctgaacttcattgacctgaccaacacagtacagcccagtgcttct
tttaaaccgctgggtctggggaatgctacagatcaccgttttctacgatatgccacgtta
ccacgtgaaatcgtgtgcactgagaatctgacaccctggaagaaacttctcccttgtggt
tctaaggcaggtctggctgttcttatgaagtcagagaagctgtttcacagcagtttccat
tctcaggctgttcacatcagacctgtctgtcaggatgaacattgcacaaataaagcatgg
gagctgagacagactctcaatgttgtgtttgatctctacacttcaggccaaggcaaaaag
gagtggtccctgtttaagatgttttctcgaacactgacagaggcatgtcctcttgcttct
tctagtaaagtctatgtggacatcacagacaaccctgagggggagctgtttgagttgagt
cctgccactcctctgctcagccaagctgtagtgctgggggatcgcaggacatattcagta
tatgacctgaccagagctgagacgtttggccaatcacggtcactcaatctcctactgcgc
tggaaaggggacagcggtgatatgctgcgtcctctgcttcatgcagagcggtacgtggct
ggttttgggctgcagacaggggaaattcatacagtcatctataataaccacccatatcgg
gctttccctgtactgctgatggattcagtgccctggtatctgcagctgtacattcacacc
ctgacagtcaccagcaagtcccgtgataacaaacccagttacattcactaccagcccgct
aaagaccgccatcgtcctcatctactggagatgctgatccagttaccgcctcactcgatg
acagaggtcacggtacagtttgaaagggccctgctcaaatggactgagtacacccctgat
cccaaccacggcttctacgttgggtcctctgtggtcagcgcccttgtgccaagtatggtt
gcaatgaacaccaacttcacacaagaccaaccgttgtttagcagttttgtcccagtcaaa
gaagaatcaagctactttgttcgagtgtacaccgaacccctgctggtaaatctacccacg
cctgacttcagcatgccctacaacgtcatctgcctcacctgcacggtggtcgcggtgggg
tacggctccttttacaacttgctgacccgcacgttccaggtggatgaaccgagtccaccg
ctggccaaacgattggccaacctcgttcgtcgcataaggggagtgccactgctgacctaa
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