KEGG   Squalius cephalus (European chub): 307145703
Entry
307145703         CDS       T11930                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform 1
  KO
K23625  ataxin-2
Organism
scep  Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:scep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scep03019]
    307145703 (atxn2l)
Messenger RNA biogenesis [BR:scep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     307145703 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 307145703
NCBI-ProteinID: XP_079705275
LinkDB
Position
1:complement(44021385..44034685)
AA seq 1014 aa
MSFRRQNQPGPGGRKTSNGTSGSMASSVPGSNSNRPTPGRNRNSVKIPSQSPPVFEGVYN
NSRMLHFLTTVVGSRCDVMVKNGSVYEGIFKTLSSRCELAVDAVHKVKNEEGDGGGGGGT
PVHPRREEITDTMIFGPSDLVTMICRDVDLNYAIRDTFTDSAIGSTRINGDHREKVLQRW
DGGDSNGENFDLDADASNGWDASEMFRFNEETYGVKSTYDSSLAMYTVPLERGSSEGFRQ
REARAARLANEIEASSQYRHRVALENDDGRTEEDKFSAVVRDRDRDGGERERGRDSPGFS
SAGSRESKYIPLPQRAREREMGVSGRNERGGAVSTLPNRTNRPGPPSSSPRPLPSGSGQP
IPPSDRSSPLSVRGGYPTHQSQSSSPTQLGHSSPPSPHTLPHSLSHPQSLSDSARPVNGV
SSRMSPKSQRPGQNNRNLRTSNSHSSPTVSRSPKPDAPSQDSPLATPTYVDTSSVTMVTP
KPTGPTPLFPVDVNEILSKERTESPVSPQDGKSGKVSTVQQRSQHLEELRKFGTDFRLPS
SSNPKTLASDSSQTNPAHNTQTDSTPPTEAKAAPPTTLTAELPAEERSRETNAEGVAITT
PPPATPISAPSALSGTAMQNPTAERQTAGTPQPGTPGSEEGKPEAAERPEGMTDQVKKST
LNPNAKEFNPNKAPLSMVKPSAAPTPPRPTPPSPTVVLQPPPGQGAIYNTQYLSYVSPIQ
IQGHSVQAPQMYPYPMTNVGQGKYPRAKGSVVTSRPDHSSSAPPMLQAAASAAGPPLVAS
PYPPSYLQYNQVISAMPHYPGQMYSMLQGGPRMLGSGGHPQAMGPPGPQYPGQTEGPPAP
QQGMYAPQSFSHHSGSLHHPQPSSTPTGSQPPQHPAPSPGQSGQSGPQPQSLYHSGPLSA
PTPPNMPPGHSSPQASYSIQGYSLPGHQPLPHPYSSLGQLTQAHVQGALSGPHHSGGHGP
PPVMLLHAPPPQQGSGPQHGPPPPQQGPHQHYAYVGHPQVAHPSQQIPFHPPGN
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgtcttttcgccgacagaatcagcctggacccggtggccgcaaaacatccaatggaact
tcggggtcaatggcttcgtcggttccagggagtaactctaacagacccactccgggaaga
aacagaaactctgtgaagattccttcacagtcaccacctgtgtttgagggtgtgtacaat
aactccaggatgctccatttcctcacaaccgtggtgggctccagatgtgatgttatggtg
aagaacggcagtgtatatgaggggatctttaagacattaagctcacgttgtgagctggca
gtggatgcggtgcacaaggtgaaaaacgaggaaggagatggaggcggtggtggcggcaca
cctgtccatcccaggagagaagagatcacagacaccatgatctttggccctagtgaccta
gtcactatgatctgcagagatgttgatctcaactacgctatccgagacactttcacagac
tctgcaatcggctcaacaagaataaacggtgaccacagagagaaggtccttcaaaggtgg
gatggaggcgatagcaacggagaaaattttgacctagatgcagatgcatctaatggctgg
gatgccagcgagatgttccgctttaatgaggagacctatggggtgaagtccacctatgac
tccagtctcgccatgtacacggttcctctggagcggggcagctctgagggcttcaggcag
cgagaagctcgagccgcccggttggccaatgagattgaagctagttcacagtatcgtcat
cgggtagcgctggagaatgatgatggacgaacagaggaagacaaattcagcgctgtggtt
cgggacagggaccgtgatggcggagaaagggaaagaggaagggatagccctgggttctct
agtgctgggagcagggagagcaagtacattcctctaccccagagggcaagggagcgagaa
atgggagtttctggaaggaatgaaagaggtggagctgtatccaccttgcctaatcgaaca
aatagacctggccccccaagctcctcccctcgacccctcccctctgggagtggtcagcct
attcctcccagtgataggagcagccctctctctgtcagaggaggataccctacacaccag
tcacagagcagctcacctacacagctaggtcactctagccctccttccccacacacactc
ccacattcactctctcacccacagtctctctcagactcggcccggcccgtcaacggagtg
tcatctagaatgtcacccaagtctcaaaggcctggacagaacaacagaaacctgcgtacc
tcaaattctcactcctcccctacagtctctcgttcccccaaaccagatgctccttcccag
gactctcctcttgctactcctacctacgtggatacctcttcagttaccatggtgacccct
aaacccactggccccacccctctgttccctgtagatgtgaacgaaattctgtctaaggaa
aggacggagagtccagttagtcctcaggatggcaagagtggcaaagtctctacagtccag
cagagatcacaacacctcgaagagcttcgcaagtttggtactgattttaggcttccatct
agttccaaccccaaaactttggcctctgattcttctcaaacaaaccccgcccacaacaca
caaacagactccacccctcctacagaagctaaagcagccccgcccacaactctgaccgct
gagcttccggcagaagagagaagtagagagacaaatgcagaaggggtggcaatcaccacc
cctccaccagccacaccaatctctgcaccctctgccctatccggcactgccatgcaaaat
ccaactgcagaaaggcaaacggcagggacgccccaacccgggaccccaggcagtgaggag
ggcaaaccagaggcagcggagaggccagagggaatgactgatcaagtgaagaaatctaca
ctcaaccccaacgccaaagagttcaaccccaataaggctcctctcagcatggtgaagccc
tcggccgctcccaccccgccacggccaactccgcccagcccaacagtggtgttgcagccc
ccaccaggccagggagccatttacaacacccagtacctgagctatgtctcgcccatccag
atacagggtcactccgtacaggcacctcagatgtacccgtatcccatgacaaatgttggt
caagggaagtacccaagagcaaaaggttctgtggtgacttctcgtccagaccacagctct
tcagcgccccctatgctccaggccgcggcatcagcagcaggacctcctctggtggcgtct
ccttaccctccctcatatctgcagtacaaccaggtcatatcagcaatgccccactaccct
ggacagatgtactcaatgctccagggtggaccacgaatgcttggatcgggagggcaccca
caggcaatgggtcccccaggcccacagtaccctggtcagactgaaggaccgccagcccct
cagcaggggatgtatgctccgcagtcattctctcatcactctggttcccttcatcatcct
cagccctccagcacccccacaggcagccagccgccccaacaccccgcccccagtccagga
cagtctggtcagtctggtcctcagcctcagtctttgtaccactctgggccgctgtcagcc
cccacaccccctaacatgcccccaggacacagctccccacaggcctcctactccattcag
ggctacagtctgccgggacaccagcccctgcctcacccgtactcctctctaggacagctg
acacaggcccatgttcaaggtgctctctcgggtcctcaccattctggaggtcacggccca
ccacctgtgatgttgcttcatgccccgccccctcagcagggttctggcccccagcacggc
cctcccccaccccaacaggggccccaccagcactacgcctatgttggacaccctcaggtg
gctcatccttcccagcagattccattccaccctcctggaaactga

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