KEGG   Squalius cephalus (European chub): 307146013
Entry
307146013         CDS       T11930                                 
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
  KO
K05707  snail 1
Organism
scep  Squalius cephalus (European chub)
Pathway
scep04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:scep00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    307146013 (snai1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:scep03000]
    307146013 (snai1b)
Transcription factors [BR:scep03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    307146013 (snai1b)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met C2CH-3rd_BIRD-IDD zf-Di19 zf-C2H2_6 Zf-C2H2_ZNF451_1st zf-C2HE Zf-C2H2_ZNF451_6th zf-C2H2_15 Teflon_C zf-C2H2_ZNF462_1st Zf-C2H2_ZNF451_C zf-C2H2_7th_ZNF462 DUF7410 zf-ZTF-17_C2H2_2 Zn_ribbon_Elf1 zf-C2H2_11
Other DBs
NCBI-GeneID: 307146013
NCBI-ProteinID: XP_079705859
LinkDB
Position
18:7639395..7643337
AA seq 257 aa
MPRSFLVKKYFSNKKPNYSELESQTDQRYAVVPLHDFHTMEGDSVVPMLVWASSALPLAF
TPASPNPPSPPGPLDLSSPSSSSSSSGEEDDCRTSDPPSPDPDSDRSQCSQCGKPCGSPA
GLSRHQLTHCTPGPQTTGAASTVTRAAFHCKHCPKEYTSLGALKMHIRSHTLPCVCGTCG
KAFSRPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHSEVKKYQCGTCSRTFS
RMSLLHKHTLSGCCPSA
NT seq 774 nt   +upstreamnt  +downstreamnt
atgcctcgttcatttcttgtcaagaagtatttctccaataagaagccaaactacagtgaa
ctggagagtcaaactgaccaacgctatgctgtcgtccctctgcatgacttccacaccatg
gaaggtgattctgtggtgcccatgcttgtgtgggccagcagtgcgttgcccctcgccttc
acaccggcctcccccaaccccccgtctcctcccgggcctctggacctgagctctccgtcc
agcagcagttccagcagtggagaggaggacgactgccgcacctctgacccgcccagcccg
gaccctgactccgaccgctcccagtgctcccagtgcgggaagccctgcggcagcccggct
ggcctgtcccgccaccagctcacgcactgcacccccggcccgcagaccacaggagccgcc
agcaccgtcaccagagccgcctttcactgcaagcactgtcccaaagagtacacaagtctg
ggtgcgctgaagatgcacatccgctcgcacacactcccctgtgtgtgcggcacgtgtggg
aaggccttctccagaccctggctgctgcggggacacattcgcacacacaccggcgagcgc
cccttctcgtgcccccactgcaaccgtgcgtttgcggaccgctcgaacctgcgagctcac
ctgcagacccactccgaagtgaagaagtaccagtgtgggacgtgctcccgtaccttcagc
cgaatgtccctcctgcacaaacacacactctccggctgctgtccgtctgcctag

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