Squalius cephalus (European chub): 307146013
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Entry
307146013 CDS
T11930
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
KO
K05707
snail 1
Organism
scep Squalius cephalus (European chub)
Pathway
scep04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
307146013 (snai1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307146013 (snai1b)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
307146013 (snai1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
zf-Di19
zf-C2H2_6
Zf-C2H2_ZNF451_1st
zf-C2HE
Zf-C2H2_ZNF451_6th
zf-C2H2_15
Teflon_C
zf-C2H2_ZNF462_1st
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
DUF7410
zf-ZTF-17_C2H2_2
Zn_ribbon_Elf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
307146013
NCBI-ProteinID:
XP_079705859
LinkDB
All DBs
Position
18:7639395..7643337
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AA seq
257 aa
AA seq
DB search
MPRSFLVKKYFSNKKPNYSELESQTDQRYAVVPLHDFHTMEGDSVVPMLVWASSALPLAF
TPASPNPPSPPGPLDLSSPSSSSSSSGEEDDCRTSDPPSPDPDSDRSQCSQCGKPCGSPA
GLSRHQLTHCTPGPQTTGAASTVTRAAFHCKHCPKEYTSLGALKMHIRSHTLPCVCGTCG
KAFSRPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHSEVKKYQCGTCSRTFS
RMSLLHKHTLSGCCPSA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttcatttcttgtcaagaagtatttctccaataagaagccaaactacagtgaa
ctggagagtcaaactgaccaacgctatgctgtcgtccctctgcatgacttccacaccatg
gaaggtgattctgtggtgcccatgcttgtgtgggccagcagtgcgttgcccctcgccttc
acaccggcctcccccaaccccccgtctcctcccgggcctctggacctgagctctccgtcc
agcagcagttccagcagtggagaggaggacgactgccgcacctctgacccgcccagcccg
gaccctgactccgaccgctcccagtgctcccagtgcgggaagccctgcggcagcccggct
ggcctgtcccgccaccagctcacgcactgcacccccggcccgcagaccacaggagccgcc
agcaccgtcaccagagccgcctttcactgcaagcactgtcccaaagagtacacaagtctg
ggtgcgctgaagatgcacatccgctcgcacacactcccctgtgtgtgcggcacgtgtggg
aaggccttctccagaccctggctgctgcggggacacattcgcacacacaccggcgagcgc
cccttctcgtgcccccactgcaaccgtgcgtttgcggaccgctcgaacctgcgagctcac
ctgcagacccactccgaagtgaagaagtaccagtgtgggacgtgctcccgtaccttcagc
cgaatgtccctcctgcacaaacacacactctccggctgctgtccgtctgcctag
DBGET
integrated database retrieval system