Squalius cephalus (European chub): 307146077
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Entry
307146077 CDS
T11930
Symbol
her9
Name
(RefSeq) hairy-related 9
KO
K06054
hairy and enhancer of split 1
Organism
scep Squalius cephalus (European chub)
Pathway
scep03460
Fanconi anemia pathway
scep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
307146077 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
307146077 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307146077 (her9)
03400 DNA repair and recombination proteins [BR:
scep03400
]
307146077 (her9)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
307146077 (her9)
DNA repair and recombination proteins [BR:
scep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
307146077 (her9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
307146077
NCBI-ProteinID:
XP_079705996
LinkDB
All DBs
Position
18:complement(20654157..20656032)
Genome browser
AA seq
291 aa
AA seq
DB search
MPADNMEKQTASPIAGAPASGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADTNVLGKYRAGFNECMNE
VTRFLSTCEGVNTEVRSRLLNHLSGCLGQMMAMNYGQPAPSQQAHLAQPLHVQLPSTLPI
NGASMGSKLSPSEAVSPKVFGGFQLVPATDGQFAFLIPNPAFASATTPVIPLYANAGVPV
AVNASPVQASSSPTAASPVHGMTSFAGVSQAVSPVGVSAGAESNEPVWRPW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgataatatggagaagcagaccgcatcacctattgctggtgcccctgccagt
ggatctcacactccggacaaaccaaagaatgccagcgagcacagaaagtcttcaaagcca
atcatggagaaacgccgcagagcgcgaattaacgagagccttgggcagctgaagaccctg
atactcgatgctcttaaaaaagatagctccagacactctaaattggagaaagctgatatc
cttgagatgacagtcaagcacctgcgcaatttgcagcgtgttcagatgaccgcggcccta
tcagctgacacaaacgtcctcggcaaataccgcgcaggattcaacgagtgcatgaacgag
gtgactcggttcctctctacctgcgagggggtgaatacggaggttaggtcgcgacttctc
aaccacctgtctggttgtttgggacagatgatggccatgaactacggtcaacctgcccca
tctcagcaggctcatttggctcagcctcttcacgtgcagcttccttcaactttgcccatc
aacggcgcctcaatgggctccaaactcagtccttcagaagcggtctcacccaaagtcttt
ggaggattccagctcgtgccagccaccgacggacagtttgcttttcttatccccaaccca
gctttcgcgtctgctacaacaccagtcattcccttgtacgcaaacgcaggtgttccagtg
gctgtcaacgccagtcccgtccaggccagctcctctcccacggcggcctctcccgtgcat
ggaatgacctccttcgccggcgtttcacaggccgtcagtcccgttggtgttagtgccgga
gcagagagcaatgaaccggtgtggagaccttggtag
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integrated database retrieval system
