Squalius cephalus (European chub): 307146251 Help Entry 307146251         CDS       T11930                                  Symbol itga5 Name (RefSeq) integrin alpha-5   KO K06484   integrin alpha 5 Organism scep  Squalius cephalus (European chub) Pathway scep03266   Virion - Herpesvirus scep04145   Phagocytosis scep04510   Focal adhesion scep04512   ECM-receptor interaction scep04517   IgSF CAM signaling scep04518   Integrin signaling scep04810   Regulation of actin cytoskeleton scep04820   Cytoskeleton in muscle cells scep05100   Bacterial invasion of epithelial cells scep05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:scep00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     307146251 (itga5)  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     307146251 (itga5)    04517 IgSF CAM signaling     307146251 (itga5)    04518 Integrin signaling     307146251 (itga5)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     307146251 (itga5)   09144 Cellular community - eukaryotes    04510 Focal adhesion     307146251 (itga5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     307146251 (itga5)    04810 Regulation of actin cytoskeleton     307146251 (itga5)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     307146251 (itga5)   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     307146251 (itga5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:scep04147]     307146251 (itga5)    04515 Cell adhesion molecules [BR:scep04515]     307146251 (itga5)    04090 CD molecules [BR:scep04090]     307146251 (itga5) Exosome [BR:scep04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    307146251 (itga5) Cell adhesion molecules [BR:scep04515]  Integrins   Integrin alpha subunits    307146251 (itga5) CD molecules [BR:scep04090]  Proteins   307146251 (itga5) SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 Membra_charge Motif Other DBs NCBI-GeneID:  307146251 NCBI-ProteinID:  XP_079706271 LinkDB All DBs Position 18:complement(26363285..26413531) Genome browser AA seq 1058 aa AA seqDB search MGSKRHRSKISASSHNPKCSPMGLSLLILLPLSVAFNLDVENPAVYNGPNGSYFGYSVDF YMTGSSVSIIVGAPKANTSQPNIREGGSVFYCPWSLSQSQCSSIDFDRQGDLNVTVNGTM HQGEFKSHQWFGATVRVHEDSVLACAPLYSWRTMADIPRADTTGSCFLAVENFTKFVEYA PCRTEFDGRKGQGYCQGGFSADFTQEGKVVLGGPGSYFWQGQLITAFKQEIVKAYYPGYF LTSVDGQIHTKQKKEITFDDNYMGYSLAVGEFSGDDNEDFVTGVPRGVRLHGQVSILNGS LDLLKTFTGEQMGSYYGYSVAVTDINNDGMTDLLVGAPMFMVRDSDGRLEELGRVYVYLQ NGPLDLTPQLPHLTGTQTFGRFGSSITPLGDLNQDGYNDVAISCPFGGENKQGLVLIYNG HAGGLREKPSQMIAGQWASAAPSALPASFGYALRGGKDLDNNGYPDLIVGAFGQDTAFLY RSRPIVNTSATLTVYPTMINPEEKVCPISRGNETLHVSCVNLSFCLTANGKHLPNDLEFN VEVQLDRLKQQQKGSIRRALFLDTHLPTQKRTMTVPNGSRVCSETKIYLRDEKDFRDKLS PIFVALNFSLNPQSAADRHGLRPILNYQTAELIEQKAQILLDCGEDNICVPDLKLSVHGD RKEVYMGDDNSLTLTFNAKNDGGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYETE NQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTHKFVQFDLQIRSKNENNSQSEVVPYK LEVVVQSDVILQGVSRPDKVFFPPPNWKLTKNVMVEQDVGPSIQHTYELVNNGPSRISHT QLQLRCPMKLQVQSNRFIYPLEVTTEGPVNCTTHNIVNPLNLKLQQSSTEQPPLRDAARE HHIEKRETHKGELSQLTNLSCSSVDCWTLTCNVGLLERGTSAILHVRSRIWAETFMENPY KNVILECLASYKVEKMPYAILPKVTPSGAKKLVTPVVWNKPDSTYAVPLWIIILAILAGL LLLALLIYVLYKLGFFKRTPYGTAMEKAQLKPQAASEA NT seq 3177 nt NT seq  +upstreamnt  +downstreamnt atgggttccaaaaggcaccgttcaaagatttcagcgtcttcacacaacccgaaatgctct ccaatgggactttcactcttgattcttctacctttgtctgttgccttcaacttggatgtg gagaacccagcggtgtataacggacccaacggtagttacttcgggtactcggtggacttt tatatgactgggtcaagtgtgagtattatagttggagcacccaaagccaacaccagtcag cccaacatcagagaaggaggatcagtcttctactgtccatggagcctcagccaatcacaa tgcagcagcatagatttcgatagacagggagatctaaatgtgactgtaaatggaacaatg catcaaggagagttcaaatcccatcagtggtttggagcaacagtacgagtacatgaagat agtgtgctggcttgtgcccccctttactcatggagaaccatggcggacatacctcgtgct gatactactggctcatgttttctggccgtcgaaaacttcaccaagtttgtggaatacgct ccgtgtcgcacagaatttgatggaagaaaaggacaaggctactgtcaaggtggattcagt gctgattttactcaggaaggaaaggtagtgcttggaggacctggcagttacttctggcaa ggccaattgatcactgcatttaaacaagaaatcgtcaaggcctattacccgggatacttc ttgacatcagtggatggccagattcacaccaaacagaaaaaagagatcacatttgatgac aactacatgggttactcattggctgtgggcgagttcagtggtgatgataatgaagacttt gtgactggagttcccaggggagtcagactccatggacaggtttccattctcaatggctct ctggatttgctgaagacttttactggagagcaaatgggctcctactatggctactcggtg gctgttactgacatcaacaatgacggaatgacagacctgctagttggcgctcccatgttc atggttcgtgactctgatgggaggttagaggagttgggtcgggtctacgtgtacttgcag aatggacctctggatctcacacctcagctacctcacctcaccggcacacagacgttcggc cggtttggcagctccattacccctcttggagatctcaaccaagatggttacaacgatgtg gccatcagctgtccgtttggtggagaaaacaaacaaggattggtgctcatctataacgga catgctggaggactcagggaaaagccctctcagatgatcgctggccaatgggcttctgcc gcaccgtcagctctacctgccagctttggttacgcccttcgtggaggcaaagacctggat aacaatggctacccagatctcattgttggtgcatttggtcaggacacagcttttctttat cggtctcgtcctattgtgaacaccagtgccaccttgactgtctacccaactatgattaat cctgaggagaaagtttgccccataagccgtgggaacgagaccctgcatgtgtcctgtgtc aacctgagcttttgcctaacagccaatgggaagcacctaccaaatgatctcgagtttaac gttgaagttcagctggaccgtctgaagcagcagcagaaggggtccatacggagagctttg tttttagacacccatcttcccacacagaagaggactatgactgtgccaaatggaagcaga gtctgcagcgagactaagatctacttgcgggatgagaaggacttcagggataagttgtct cccatcttcgttgcgctcaacttcagcctgaaccctcaatccgcggcagacagacacggc ctgcggcccatcctcaactaccagacggcggagctcatcgaacagaaagcccagatttta ttggactgtggagaggacaacatttgcgtccctgacctgaaactctccgtgcacggggac aggaaggaagtgtacatgggcgatgacaactctctgaccctgactttcaacgcgaagaac gatggaggcggagcttatgaagccgagctgtatgtggtcttgccaccagaggccgactac agcggaatagcccgcaataatgagagtctgacccagctgacctgcagttatgagacggag aatcagacccgttacctcagctgtgacctggggaaccccatgaaatcaggcaccagccta tgggccggactgcgattcacagtaccacgtctcaaggacacacacaaatttgtgcagttt gacctacagatccgtagtaagaatgagaataactcccagagtgaagtcgtcccctacaag ctggaggtggtggtccagtctgatgttattctgcagggtgtttccagaccagacaaggtc ttctttcccccaccgaactggaagttgaccaagaatgtaatggttgaacaggatgttgga ccctccatccagcacacttacgagttggtgaacaacgggccgagccgcatcagtcacact caacttcaacttagatgccccatgaaacttcaggttcaaagtaacaggttcatttaccca ctggaggtcacgacggaggggcctgttaactgcaccacccacaacatagtcaaccctttg aacctcaagctccagcagtcttctaccgagcagcctcctttgcgagacgcggcacgggaa caccacatcgagaagagggaaacgcacaagggcgagctgtctcagctgaccaatctgtct tgctccagtgtggattgctggactcttacgtgtaacgttggcctgttggagcgagggacg agtgccatactgcatgttcgctcgcgaatctgggcagaaacatttatggagaatccttat aaaaacgttattctggagtgccttgctagttacaaagtggaaaagatgccatatgccatt ttgcccaaggtgactcctagcggtgctaaaaagttggtgactcctgtggtctggaataag ccggacagtacatacgctgttcctctgtggatcatcattctggctattctagccggcctt ctgctgctcgcactgctgatctacgtcctctacaagctcggcttcttcaagagaactccg tacggcaccgccatggaaaaagcccagctcaaacctcaggctgcgtccgaggcctaa

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