Squalius cephalus (European chub): 307146461
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Entry
307146461 CDS
T11930
Symbol
frmpd1a
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scep04990
]
307146461 (frmpd1a)
Domain-containing proteins not elsewhere classified [BR:
scep04990
]
Other domain-containing proteins
FERM domain-containing proteins
307146461 (frmpd1a)
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GFIT
Other DBs
NCBI-GeneID:
307146461
NCBI-ProteinID:
XP_079706588
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Position
2:48918059..48953026
Genome browser
AA seq
1762 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRESISRERVLEDGQVADNGSQDQRSCPIRVTV
KIPLDPTLNSHGFTVSTHTPPQVLDVTEGGPADGKLVPGDQLFKINNVAVDDLSTEQAAD
IIRECQNTIILTVLRNTVGPKSSFITPEKRAKLKSNPVKVRFAEEVVVNGHSQGNSLLFL
PNVLKVYLENGQTKAFKFESKTTVKDIVMTLKEKLSITRIEHFSLVLEQQYSISKLYLLH
EEEIIQKVAEKQETHDYRCLFRVCFLPRDFKSMLKEDPVAFEYLYLQSVSDVLQERFAVE
MKCNTALRLAALLVQEKLASSGQSLKTPLKAMMKEWGIESFVSHTLLRNMREKDLKKAIS
YHMKKILSQEPKQKVISVNRARLNYLNEMSELKSYGGKAFSATMMLQDRESMVSLLVGAQ
YGVSQVINHKLSIMTTLTEFSCITRVELLPESDRVSLVKIYLQDIKPITLLMESVAAKDL
LCLVAGYCKLFVDPQICVFPWSTNSKSHRISAEEGYVSHCGSDSDDSDTDVDALLTHVAS
TAKSNKTAVKPKDKLPEGTEKTQSNNKKDEEVEKEGGKEEEVVEKKEKEEDKETIHEHGN
NGKTVETDDERVGTEKEDKEQEKKPEQPQCIIIVDDPSSEASDSYQTESHFMTSMSSDSI
DALEEDDLMTYFSTRRPCHLPVKDSYCCEDRYSPALSPQQLHSKDSHSQSDLCSTDSHCE
SDIDQFFCFAALSNIAECLPSPPAASEEEDCEELGPETEKHEKRSPAKCPGTTQPPPGDY
VFTFEQGDTRHYYNICSNVTPDSARSIPQPLSPPGPIETQPDREGREVNQTVTVPIFQPP
PGFGDSSSDDEFFDAQERFISPEEPSSSTMTRENSAKPSTISLGGIGICVSEQEAEDLEK
KQKEEGKMITQEEFSNFNKRSKKRRSFMETNYTSLVSFPEHDQLDNSYGNSIPSYGSISV
NYGAGQIACFDGGCSDQGPCPTVSSLTDSEGEPSPLESKPINPSKVNGSGPDNRTDTQVG
HSNKAYQRKQQLIAMEPDSMEFKSVSELMSSVSPTIVAVRSRMDLQDKGSSSNHGRDDEE
EGAVGGLVERLFGGHLFFDISGGKCDSSVLFGQRDDHVTKQMEDSSQARLVTQKSSSLPR
LGQLSPSSLPYFHLPSISYTTSPNIDKDDDTVYLESGMGKCSVDPTERTRSQSMSAYFGS
GAPHCPSRQLFSQPVVGPESDETDNSCNASIQELSSGVPSYEPAQRFLLTPCSSGILGQL
SASTLRGKIQSLPLYLSRSQEMLTASSNVSGNVKPVRRLSETQLQRNEVEVAKEVTEDVT
LNVGAPEVTEVKVVTIVSEEVTEVIEEIREVNHISPQACGQHKAKTEPKEFSVLAISPLC
SKADNSLQVSPSSVVVTTQNLNGPWGVVTSGGLQEYSCPPSSTTPQNFTSSCGVFTNCQS
KPTIAQPQSLPSPNQHKKQDLSCSSVLAMGCDTVMESAETPLEVCQTVYTNCFSGVLDSA
SFDDELTVYEFSRRTSQGETGDTVLTSVPPSSLSASPASFSPSSPLPSFPHLVLPASSST
ELSPLLSPLDAPNCFLTNPHGDIMTSLLTRRYPLPPTGFLSLQRDVDTILSVLAGAIKNQ
DRVHEHPRDTCVAHFSENKRRLHAEARGLLAGCQRVVRVGQTPEETLQSLSESFRSLVQL
TIVCLCFSSCQRCRERHVQALTGLANVAKTYQDFARAAELVGSASERKTCHDLSIKLLAR
QCTALTTSVFCLTQLFRTLTAL
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggaccgcagtcgctcaccatctcgcaggaccagcagagtagaacaggtg
gtgggacgctggcttcgccgctccagagagtccatcagccgcgagcgtgtgttagaagat
gggcaagttgctgacaatggctcccaggatcagaggagctgtccaattagagtcactgtt
aagatcccacttgaccccacccttaactcccatggcttcactgtatcaacacacactcca
ccccaggtgctggacgtgacagaaggaggcccggctgatggaaagcttgtccctggtgac
caacttttcaaaataaacaatgttgctgttgatgatctatctactgagcaagctgctgac
atcatcagagaatgtcagaacaccataatactgacagtcctgagaaatactgtggggcca
aagtcgtccttcataactccagagaagagagccaagctgaagtcaaaccctgttaaagtg
aggtttgcagaggaggtggtggtcaatggtcactcacagggtaactctctgctgttcctg
cccaatgttctgaaggtctatctggagaatggccaaacgaaggcttttaaatttgaatct
aaaaccactgttaaggacatagtgatgactctgaaggagaaactatcaatcacccggatc
gaacacttctctctggtacttgagcaacaatacagcatcagcaaactatatctactacac
gaggaagagattattcaaaaggtggctgaaaagcaggagactcacgactacaggtgtctg
tttcgtgtctgttttctaccgagagactttaagagcatgctcaaagaagatcctgtggcc
tttgagtatctatacttacagagcgtgagtgatgtattgcaggaaaggtttgcagtggag
atgaaatgtaatacagctctcagactggctgctctacttgtacaggaaaaactagcaagc
agtggacaatctcttaaaacacctctgaaggccatgatgaaggagtggggtattgaaagc
tttgtgtcccacaccttactgcgaaacatgagagagaaggacttgaagaaagccatcagt
taccacatgaaaaagattctatctcaggagccaaagcaaaaggtgatctcagtgaatcgt
gctagactgaactacttgaatgagatgtctgaactcaagtcctatggaggaaaggctttt
agtgcaactatgatgctgcaggacagagagtcaatggtgagtttgttggtgggagctcag
tatggggtgagtcaggtgatcaaccataaactgagcatcatgaccacactaactgaattc
agctgcattaccagagtggaactattacccgagtctgacagagttagtctggtcaagatc
tacctgcaggatataaagccaataacgttgctgatggagtcagtggcagcaaaagattta
ttgtgtctggttgctggatactgcaaactatttgtggacccccagatctgcgtgttcccc
tggtcaactaattcaaagagccaccgcatatcagcagaggagggttatgtgtcacactgt
ggcagtgactctgacgactcagacacagatgtggatgctctccttactcatgttgctagc
actgctaaaagcaacaaaacagcagttaaacccaaagataagctaccagagggaactgaa
aaaacacaaagtaacaataaaaaagatgaagaggtggagaaggaaggaggcaaagaagag
gaggtggttgagaagaaggaaaaggaagaggataaagaaaccatccatgaacatggtaat
aatggaaagacagtagaaacagatgatgagagagtaggcacagaaaaggaagacaaagag
caagagaaaaagcctgaacaacctcagtgtatcatcattgtggatgacccttcatctgaa
gcatctgattcataccaaactgaatcacatttcatgaccagcatgtccagtgactctata
gatgccctagaagaggacgacctgatgacctacttctctaccagacgcccatgccattta
ccagtgaaagactcttactgctgtgaagaccgctattcaccagcattgtctccacagcaa
ctgcacagcaaagattcccattctcaaagtgacctgtgctctactgattcccattgtgag
tctgatattgaccaattcttttgctttgctgcactctcaaatattgctgaatgtctacct
agtccccctgcagccagtgaagaggaggactgtgaggagttggggccagagactgaaaaa
catgaaaagaggtcacctgcaaaatgtcctggaaccacccaaccccctcctggagactat
gtgttcacctttgaacaaggagacactagacactactacaatatctgctccaatgtgacc
cctgacagtgcccgcagcattccacaacctctctctcctccaggtcctatagaaacacaa
ccggatcgggaaggaagggaagtaaatcagacagtaacagtgccaatttttcaacctcca
ccagggtttggagacagcagttcagatgatgagttctttgacgctcaggaaagattcata
tcccctgaagaaccctcctcaagtacgatgacaagagaaaattctgcaaagccaagcacc
ataagcctaggtgggattggcatctgtgtcagtgaacaagaagcagaggatctagagaag
aaacaaaaggaggaaggaaaaatgattacacaagaggaattttcaaatttcaataaaaga
tccaaaaagcgtcgctcatttatggaaacaaattacacatccctggtatcattcccagaa
catgatcaattagataacagctatggaaatagcataccaagctatggttctatatcagtc
aactatggtgctggacaaatagcttgttttgatggcggatgctcagatcaaggtccatgt
ccaacagtctcatctctgaccgattctgaaggagaaccatcaccactggaatcaaaaccc
atcaacccatccaaagtcaatggatcaggaccagataatcgtactgatacacaagtggga
cactcaaacaaagcatatcagcggaaacagcaacttatagcgatggaaccagattccatg
gagttcaaatcagtctctgagctaatgtcttcagtatcgccaactatagtagcagtacgc
tcccgcatggacctacaggacaaaggtagttccagtaaccatggcagagatgatgaggag
gagggtgcagttggaggtcttgttgagagactgtttggaggccacttgttctttgatata
tctggaggaaagtgtgatagcagtgttttatttggtcaaagagatgaccatgtaaccaaa
caaatggaggattcatcccaggccagattagtgacccaaaagagcagttcactgccaaga
ctaggccagttatccccatcaagtttaccctacttccatctcccgagtatatcatacacc
acaagccctaatatagacaaggatgatgatactgtatatctagaatctgggatgggaaaa
tgctcagtggaccccacggaaaggacaagaagtcaaagcatgtctgcctactttggcagt
ggtgcaccacattgcccatcaagacaattattttcccagccagtcgtaggaccagaatct
gatgaaactgacaattcttgtaacgcttccatccaagaactgtcttctggcgttccttct
tatgaaccagcccagagattccttcttacgccctgttcatctggcatccttgggcaactt
tctgcctcaacattgcggggaaagatccagagccttcctctctacttatcacgttcccag
gaaatgctaactgccagttctaatgtcagtggcaacgttaagcctgtgagaagactttca
gaaacacaactacaaagaaatgaagttgaggtagcaaaagaagtgactgaggatgtgaca
ttgaatgtaggtgctcctgaagtaacagaggtaaaagtggttaccatagtatctgaagaa
gtaactgaagtcattgaggagataagagaggtcaaccatattagtcctcaagcatgtgga
cagcataaagccaaaactgaacctaaagagttttctgtattagccatatcccccttgtgt
tccaaagcagacaactctctccaagtcagcccctcatctgtagtggttactacacaaaac
ctaaacggaccctggggggtggtaacatccggtggattacaagaatatagctgccctccc
tcaagcacaactccccaaaactttacgtctagctgtggggttttcacaaactgccagtcc
aaacctaccatagcccagccacaatccttgcccagccccaatcaacataagaaacaagac
cttagctgcagctcagtactggctatgggttgtgacactgtaatggagagtgctgagaca
cctttagaggtctgccagacagtatacaccaactgtttcagtggagttcttgacagtgcc
agcttcgatgatgaactcactgtctacgagttttcccgcagaacgagccagggtgaaaca
ggggatacagtgctgacatctgtccctccttcctctctctctgcatcccctgcatctttc
tctccatcttctccattgccctcattccctcatctagtactgcctgcttcgtcatctaca
gagctcagtccccttctgtctcccctggatgctccgaactgcttcctaacgaacccccat
ggagatatcatgacttcactgctgactcgccggtatcccctaccaccaacaggattcctt
tctttgcaaagggatgtggataccatcttaagtgttcttgctggtgctataaagaaccaa
gatagggtccacgagcaccccagggatacctgtgtggctcacttttcagagaacaaaagg
cgattacatgcagaggctcgggggcttttagctggatgccagcgtgtggtcagggttggg
cagacgccagaggaaacacttcaatcattgtctgaaagcttccgctcgctggtacagctg
acaattgtatgcttatgtttctctagttgccagcgatgcagggagcgccatgtccaagca
cttacgggactagcaaatgttgcaaaaacttatcaagactttgctcgggcagcagagctt
gtgggaagtgctagcgaaaggaagacatgtcatgatctgagtattaaactcctggctcgc
caatgcactgcactgacaacctcagtcttctgcctcacccagctctttcgcactctcact
gccctttga
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integrated database retrieval system
