Squalius cephalus (European chub): 307146567
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Entry
307146567 CDS
T11930
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform 1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307146567 (vps35l)
Membrane trafficking [BR:
scep04131
]
Protein recycling
Others
Retriever complex
307146567 (vps35l)
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307146567
NCBI-ProteinID:
XP_079706832
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Position
19:9992038..10015011
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AA seq
963 aa
AA seq
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MATVQWHSRGRKYESEWQGCRLERSAVEFSDYHPLKAITVTDSKSRRGGRKGSTSSTSSS
SSSVVLDPLSSMLDGTDPLSLFAAASETPTLPHSISAGELGRKRLEKEEEVGLDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDKSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRILTMCADPHPLPESFSADEVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNRFLTKSGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGESVQNQLGLQRVEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMDRCKK
LGNNALLLNSVMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPES
ERLSILNEAWKVITKVRGPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYPQLQSVINKILPYFHDFSVLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEA
TRDPVILNALLHICKTMHDSVNALTLDDERRSLALLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITIPSLTSIFS
RLNLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRTISIEGKQRSSEPFFLEFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLIGQVLDHLKTLGRDEGVRRQGSLAFSLFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGFCETRTSVRTLEYIKHQAQLADMSHLSDITARLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggctacagttcagtggcactctcggggccgtaaatatgagagtgaatggcaggggtgt
cgtttggagcgttcagcagtggagttcagtgactatcatccactcaaagccatcacggtg
acagattctaaatctcgacgtggggggcggaaaggcagcacctcctctacatcttcttcc
tctagttctgtggttctggatccactcagctcaatgcttgatgggaccgacccactgtct
ctcttcgctgcggcatctgagaccccaactctcccacacagcatctctgctggggagttg
gggcggaaacggctggagaaggaggaggaagtgggcttagactttgagccgtggtcatct
aaacgtggagagatcctgtctagattcaccaccactgagaaactgtctataaacctcttc
atgggttcagacaagagtaaagcatccagtcccagctcagccgtgtcagagaaggtgcgc
actcgtctggaagagctggacgacttagaggagggctcacagagggagctgttgaacctg
tcccagcaggactatgtgaaccgcattgaagagctcaaccagtctctgaaggaggcctgg
ggttcagaccagaaagtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtaattcagttctacccgagcaagtttgttctcatcacagatatcctggac
acctttggtggtctggtgtatgacaggatcttgaccatgtgtgctgaccctcatccttta
ccagaatcgttctccgctgatgaagtgaatgacacagccaaagagacgtgtctcaactgg
ttctttaaaatcgcctccatcagagagcttgtccctcgattatatgttgaagctgctctt
ctgaaatgcaaccgcttcttgactaagtctgggattcaggagacgctgcagagactgaca
gcgatgatcagaggaataggagatccgctggtggctgtatatgcacgggcgtatctatgc
agggttgggatggaggtggcgccgcatctgaaggacagtctcaataagaatttcttcgac
cttttggcctcgttccgtcaaattcatggtgaaagtgtgcagaatcagctggggctgcaa
cgggtggagattcccatctatctgaccctctattctcctgccattcactggatcctgcag
tgtgtggcatacagagcaccagaggttctcctaacagagatgatggatagatgcaagaag
ttgggcaacaatgctctcctgctgaactctgtcatgtgggcattccgggcagaatttgtt
gcaacgagagcaacagactttattggcatgatcaaagactgtgatgaggctggatttccc
aagcacttgctgtttgcgtctctgggtcgcagtctgtcctgtgctgaccctccagagagc
gaaagactctccatactcaatgaagcctggaaggtcatcactaaagtgcgcggcccaagg
gattacatcaactgtgctgagatctgggtggagttcacctgccgccacttcacaaaacgg
gaggtgaacacggttcttgctgacattatcaaacacatgactccagacagagctttcgag
gatgcttatccacagctgcagtcagtgataaacaagatccttccctacttccatgacttc
tctgtgctcttctctatggagaagtttttgccctttctggacatgttccagaaagacagt
gtgagggtggaggtgtgtaaatcaatcatggaggtctttatcaaacaccagcaggaagca
acgagagaccccgtcattctcaatgcgttgctgcacatctgtaagaccatgcacgactct
gtcaatgctctaactctagatgatgagagaagatctctggctcttctgatcaacggattt
attcgtatggtgtctttcgggagggactttgaacagcagttgagtttctgtgtagaagcc
cgagcgaccttctgtaatctagagcccgtcatcattcacctgatacatacggtgaatcag
ttagccatggagaccagacgtgtgatgaaaggcaatcactcacgtaaaacggctgctttt
gtcagggcgtgtgctgcctacagtttcatcactattccatctctcacgagtatctttagt
cgtctcaacctatacctgctctctggacaggtagcgctggccaaccagtgtctgtcccag
gcggacgcatttctaaaggcagcggtcagtattttgccagaagtcccgcgtaccatcagc
attgagggaaaacagcgatcatcggagcccttctttctcgaattcattaacaacttcctc
tccacactgctcgtagtgccggaccatccggagcagggtgtgctgtatctggtgcgaggg
ctcttgaatatggtgcaggactacacctgggaggacaacagtgatgccaaggtccgcgtc
tacatcagtgctttaccattgctagcagcaatgagccaggaaagctatctctacaccatt
cctaaagtggattccaatgaaaccctctatggaggagatcccaagttcatcgcagagatc
aacaagttgtgtgagactctgattggtcaggttctggatcatttaaagactctgggccga
gatgagggagtgcgcaggcagggcagtctggccttctctctgttcggctgtctgttggct
cacggtgatctacggaacaacaaactcaaccagctggctgtcaacctgtggaacctcagt
cacaaacacggcttctgtgagacacgcacatcggttcggactctagagtacatcaaacat
caggcacagctggctgacatgagccatctctctgacatcacagcacgtctgtctctgcag
tcccgagcctaa
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