Squalius cephalus (European chub): 307147001
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Entry
307147001 CDS
T11930
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
scep Squalius cephalus (European chub)
Pathway
scep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307147001 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307147001 (rangap1b)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
307147001 (rangap1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_4
LRR_NLRC4
CDC45
Tim54
BUD22
Motif
Other DBs
NCBI-GeneID:
307147001
NCBI-ProteinID:
XP_079707550
LinkDB
All DBs
Position
19:19937420..19943413
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AA seq
577 aa
AA seq
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MASEDIAQITEALAKTHVGEVELSYKGRGLKLDNAESVKEMVKEIEQCQGLQSLRLEGNT
LGVEAAQAISKALEAKSELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLDLS
DNAFGPDGVKGIESLLKSPVCYTLRELRLNNCGMGIGGGMVLASALTECYKQSSAAGSPL
KLKVFIAGRNRLENNGATALAKAFKVLGSLEEVHMPQNGINHPGITALAAAMKHNPNLQV
LNLNDNTFTKRGSIAMAEGIRHLRCLKVINFGDCLVRSEGAIAIAGALREGLPFLRELNL
SFGEICEAAALVVAKAVQGKADLEKLDLNGNCFGEDGCEALREAMEGMNMEELLGSLSDD
EGEPEEDDDDDEEEEDDDDDNDDDDDEEEEGKEEGDTEENGVNGTKDIIEEKEKPHCSSE
FASFLISPSAEKLLSFGAKRIQLIEQVDVSDACKVSEVFLKTSSVYEDEPEVKQAVFETT
DALLRKAFSNSHSQSSSLIFSLIVNLGLLKSEDKKIKKVSVLPGHLLALEHAAAQEFFPA
DQAGILEAFVSRNGKVLESCSSARDALKTTLVKRTTA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaagatattgctcagattacagaggctctggccaagactcatgttggagaa
gtggaattaagttataaaggacgagggctgaagttggacaatgctgagtctgtgaaagag
atggtgaaggagattgaacagtgtcagggtttgcagtccctcagattagagggaaacaca
ctgggggttgaagcagcacaggccatttccaaagctcttgaagctaaaagtgaattggag
caatgtcattggagtgacatgttcacgggtcgccttcgctctgaaattccacctgctctg
aaatcattgggcaatgctttgatgacatcaggggccagactgactcagctggacctgagc
gacaatgctttcggccctgatggtgtaaaaggaattgaaagcctcctgaagagccctgtg
tgctacaccttacgtgagctcaggcttaataattgtggcatgggcattggaggggggatg
gtcctggcttctgcattgactgaatgctacaagcagtctagtgcagctggctcccccctg
aagttaaaagtcttcatagctggacgtaatcgtctggagaataatggtgccactgcactt
gccaaagcatttaaggtgttaggcagtcttgaggaggtccatatgccacagaatggaatc
aaccatcctggtatcacggctttagccgctgcaatgaagcacaacccaaacctccaggtc
ctcaacctcaatgacaacacttttactaagagaggatcgatagccatggcagagggcatt
aggcacctccgttgtctgaaggtcatcaattttggggactgtctggtacgctcagaaggt
gctattgctatagcaggggcccttagagagggtctgccattcctcagggagctgaatttg
tcatttggagagatttgcgaagctgcggctttggtagttgcaaaggctgttcaaggcaaa
gctgatctggagaaactggaccttaatggaaactgctttggagaggacggctgtgaggct
ctcagggaagcgatggagggcatgaacatggaagagctgctgggctcgctcagtgatgat
gaaggagagcctgaggaagatgatgatgatgatgaggaggaggaggatgatgatgatgat
aatgatgatgatgatgatgaggaggaggaggggaaggaagaaggtgatacagaggaaaat
ggtgtcaatggaacaaaagatatcattgaagaaaaggaaaagcctcactgcagttctgag
tttgcatccttcctcatctccccgtcggctgagaaactgttatcctttggagccaaaagg
atccagctcattgagcaggttgatgtttcagatgcttgtaaggtgtcagaagtatttctc
aagacctcctcagtatatgaagatgaaccggaagtaaagcaagctgtttttgagaccact
gatgccctgttgaggaaagccttttccaactcccactctcagtcttctagtttgatcttt
tcgctgattgtgaacctgggacttttaaagagtgaagataaaaagataaagaaggtatct
gtactgcctggacacttgctcgctttggagcacgcagctgcacaggagtttttcccagcg
gatcaggctggcattctggaagcatttgtgtcacgaaatggcaaagtcttagaatcctgc
tccagtgccagagatgctctcaagaccacactggtgaaaaggaccactgcttga
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