Squalius cephalus (European chub): 307147135
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Entry
307147135 CDS
T11930
Symbol
LOC307147135
Name
(RefSeq) somatostatin receptor type 2
KO
K04218
somatostatin receptor 2
Organism
scep Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
scep04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307147135 (LOC307147135)
04081 Hormone signaling
307147135 (LOC307147135)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scep04030
]
307147135 (LOC307147135)
G protein-coupled receptors [BR:
scep04030
]
Rhodopsin family
Peptide
Somatostatin
307147135 (LOC307147135)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
UL78
7tm_4
Motif
Other DBs
NCBI-GeneID:
307147135
NCBI-ProteinID:
XP_079707760
LinkDB
All DBs
Position
19:complement(2562976..2565117)
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AA seq
342 aa
AA seq
DB search
METAVPLGMFYDNVSVLGAAINNVYIQKNFNAFSVTMAVMYLAVCIVGLAGNSLVIITIL
KLDKMSSATTVYIFNLALADGLFMVGLPFIAIQNFQDQWIFGDAVCKLVMVLDGINQFTS
VFCLTVMSVDRYMALVDPMRFARWRTPRRAKIIAALMWFISLFPVLPMAINFSVNYGLCT
VDPQVASYTWWLTFLSYTFALGFALPFTVMIVFYTALLVTLRNARTQTSSSLESHRLEKQ
VTKMVVAVVLVFGVCWLPFYVFNFCSLHRPDQAQDFTRGFEFVVLLSYSWSCANPILYAC
LSETFRRHFHALLCPHKSSPTHCNRDTEGYILRDTIAQGVLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggcagtgcctttgggaatgttttacgacaacgtgtcggttctaggtgccgcg
ataaacaacgtctacatccagaagaacttcaacgcgttcagcgtcaccatggcagtgatg
tacctggccgtttgcattgtgggattggccgggaactcgctggttataatcaccatccta
aagctggacaaaatgtcttcggcgaccaccgtctacattttcaacttggctttggctgat
ggactcttcatggtaggactcccgtttatcgctatccaaaacttccaagaccagtggatc
ttcggagatgccgtttgcaagctggttatggttctagacggcattaatcaattcacaagc
gtgttctgcctgacggtaatgagcgttgaccgttacatggcgctggtagacccgatgcga
ttcgctcgttggcggacgccacgacgggcgaagatcatcgctgcattaatgtggtttatc
tctctatttcccgtgcttccaatggctattaacttttctgttaactacggtttgtgcacc
gttgaccctcaagtcgcatcttacacctggtggttgacctttcttagctacacgtttgca
ttgggctttgctttgcccttcaccgtgatgattgtgttttacacggcactgttagtgact
ctgagaaacgccagaacgcaaacttcttcttcgctggagagtcacaggctggagaaacag
gttactaagatggtggtggcggttgttttggtgtttggcgtttgctggctgccgttctac
gtcttcaacttttgctctctgcaccgaccggatcaggcgcaggatttcactcgtggcttt
gagtttgtggtgctgctgtcgtactcgtggagctgtgccaatccaatcctgtacgcatgt
ctgtcggaaacttttcgaaggcatttccacgccctcctctgtccccataagagctcgccg
acacactgcaaccgagacaccgaaggctacatcctgcgcgacaccatcgcacaaggcgtg
ttagcttag
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