KEGG   Squalius cephalus (European chub): 307147145
Entry
307147145         CDS       T11930                                 
Symbol
slitrk1
Name
(RefSeq) SLIT and NTRK-like protein 1
  KO
K25832  SLIT and NTRK-like protein 1
Organism
scep  Squalius cephalus (European chub)
Pathway
scep04514  Cell adhesion molecule (CAM) interaction
scep04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:scep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    307147145 (slitrk1)
   04517 IgSF CAM signaling
    307147145 (slitrk1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_14 LRR_LRWD1 LRRNT LRR_9
Other DBs
NCBI-GeneID: 307147145
NCBI-ProteinID: XP_079707770
LinkDB
Position
2:complement(59921255..59925063)
AA seq 695 aa
MLLWIVLLKAALCVAIGNVTRDVCKEQICSCNAIEGDLHIDCEKKSFTNLHHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FKKSTFLGLDDLEYLQADFNLLRDIDPSVFRDLSKLEVLILNDNLISSLPINVFQNVPIT
HLDLRGNRIKTLPYEGILEQIPGIVEVLLEDNPWDCNCDLVSLKEWLENIPQNALIGRVI
CEAPTRLQGNDLNETAETELCPSKSGMDSSLVAPPTQDETPNRGPHPTPSKTSGVTESHN
AGGGHNKGRPKARENWQLKIKPTAMATGTIERELPANSSCPQSCSCKLIGARQGLGVNCE
GRKIETVANLKPKPLSAHELNLRDNNIHAVRRNQLRGYHSLNLLDLGGNNIKMIENGTFH
NLTELRWLYMDKNYLDTLMAEMFIGLQNLEYLSLEYNDIQLIMPGTFSPIPNLRVLFLNN
NLLKALPVDAFLGVSLSKISLHNNYFTYLPVPGVLDQLNSIIQIDLHGNPWDCSCNIVPF
KQWTDKLGADVIVSDLKCESPEEFWKRDFRRIRNDLMCPQLYEKISPTSLSKNSTLPADT
GTRPNSYLEPSRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSSASEIN
SLQTVCDSSYWHSGAYHADAPHRGFDCGAHSLSDK
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgctgctttggattgtgttgctgaaggcggctctttgtgtagctatcgggaatgttaca
agggacgtctgtaaggagcagatctgctcctgcaatgcaatagaaggtgatttgcacatt
gactgtgagaaaaagagcttcacaaacctgcaccatttgacaggtccgagctctcagttt
taccacctcctgcttcacgggaattctttatccagactgttccctaacgagtttgctaac
ttttacaatgccgtgagcttgcatttggagaacaatggcttgcacgacatcgtgccgggc
gctttcctgggactgcagcttgtgaaacggctgcacatcaataacaacaagatcaggtct
ttcaaaaagagtacgtttctcggtttagacgacctggagtacctccaagccgacttcaac
cttctgagggacatcgacccgtctgtgttcagggacttgagtaagctcgaagttttaatc
ttaaacgacaaccttattagctctcttcccatcaacgtgtttcagaacgttcccatcacg
cacctcgatctgagagggaaccgaataaaaacgttgccttacgaagggattctagagcag
atacctggcattgtggaggttttgctggaggacaacccatgggattgcaactgcgacctg
gtttccctaaaggaatggctggagaacatcccgcaaaacgctctcatcggaagggttatt
tgtgaggcgcccactcggctgcaagggaatgacctgaacgaaacggccgagacggagctg
tgcccttcaaagagtggtatggattccagcctggtggcgcctcccactcaggacgagacc
cctaatcgcggcccccatcctacaccctctaaaacgagcggggtgacggagtcccataac
gctgggggagggcataacaaggggcgtccgaaagccagggagaattggcagttgaaaatt
aagcccacagccatggcgaccggcaccattgaaagagagctgccggctaattcgtcctgc
cctcagtcttgtagttgtaagcttataggagctagacaagggcttggggttaactgcgaa
ggcaggaagatagaaaccgtggctaatctcaaacccaaacccctgagcgcgcacgagtta
aatctgcgcgacaacaacattcatgccgtcagaaggaaccagctcagaggctatcatagc
ttgaatttactcgatttgggggggaataacataaaaatgatcgaaaacggcacttttcat
aacctgaccgagttgaggtggctctacatggacaagaactacttggatactttaatggcg
gagatgttcatcggacttcagaacctggagtatctcagtttggaatataatgacatccag
ctcataatgccgggcaccttcagcccgatacccaacttgagggtgctcttcctcaacaac
aacctgctcaaagctttacctgtggatgcgttcttgggggtttctttgtctaaaataagc
ttgcataacaattatttcacatatctccctgtgccaggtgtcttagaccaactcaactcc
attattcagatcgatttgcacgggaacccctgggattgctcgtgcaacatcgtccccttc
aaacagtggacagacaaactcggggcagacgtcatcgtgagcgatctcaaatgcgagtcc
cccgaggagttctggaagagggacttccggcgaatcaggaacgatcttatgtgccctcag
ctctacgagaagatctcccccacctccctgtccaaaaacagcactttaccagcagacaca
gggacgcggcccaactcctacctggagcccagcagagtgtcaatatcagtgctcgtgccc
ggtctgctgctggttttcgtgacgtctgccttcaccgtggtgggaatgctggtctttatc
ctgcgcaatcgaaagaggtcgaaacggagagacggcaactcatctgcatcagaaatcaat
tctttacagacagtttgcgactcgtcctattggcacagcggagcttatcatgcagacgcg
ccacacagaggtttcgactgtggtgcccactctctctccgacaaatga

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