Squalius cephalus (European chub): 307147211
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Entry
307147211 CDS
T11930
Symbol
llgl2
Name
(RefSeq) LLGL scribble cell polarity complex component 2 isoform 1
KO
K06094
lethal(2) giant larvae protein
Organism
scep Squalius cephalus (European chub)
Pathway
scep04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
307147211 (llgl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307147211 (llgl2)
Membrane trafficking [BR:
scep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
307147211 (llgl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_NOL10_N
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_VPS8
Beta-prop_WDR5
WD40_WDHD1_1st
Lgl_C
Beta-prop_WDR3_2nd
DSE1_N
ASA1
Beta-prop_WDR90_POC16_2nd
HBM
Motif
Other DBs
NCBI-GeneID:
307147211
NCBI-ProteinID:
XP_079707897
LinkDB
All DBs
Position
19:complement(27413980..27442990)
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AA seq
1020 aa
AA seq
DB search
MKRFRRHGHESQRDKHKQDLYQFNKTVEHGFPHQPSALGFSPSLELLAIGTRSGAIKLYG
APGVEFMGLHDENAAVTQVHFLPNQLEFVTLLDDNSLHMWTLRGHNSMSELLEMGRFTLS
GPPGAPPSVTRVTAVLAHSSGELLLLGTEGGHVFVVEVPGFRELEENNISVEDVQNRVPE
DYVGRRNLECVEALHENPLNPRQVLIGYSRGLMVLWDLDRQRPIQHFLSTQQLESVWWME
DGANILSSHSDGSYCQWTVTGEDPQTEPEKQEIPYGAFPCKAISKIIQLPSKQGPPFLIF
SGGMPRASYGDRHCISVIHSKTHEALDFTSRIIDFFVIREGENHRGEPSALVVLVEEELV
VVDLQTEGWPVIQTPYLVPLHCSAITCSHHVSSIPLKLWERVHAAGAQQSTHYSKKPWPI
NGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFHTDADPNDNMNQG
SEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVMELNDEAAEQMV
EATVVDLLQGQEGFRWKGQARLDVREEPVLFPPGFQPFALVQCQPPAVVTAIALHSEWKL
VAFGTSHGFGLYDYHQRNNVFVKCTLNPSDQMALEGPLSRVKSIKKSLRQSFRRIRRSRV
SMRKHHTNNAAKLQEINARLEAEALQEMELAPVQRKIEARSSDDSFTGLVRTLYFADTFV
SDSSHSTPSLWAGTNGGAVFAYVLRVPSLERRAEDPVVAHAAKEIQLMHRAPVVGLVVLD
GKGSPLPEPLEVAHDLARSPEMHGSHNLLVVSEEQFKLFTLPKVSSKSKLKLTAVDGSRV
RRVGVAWFGSRTDEQLESSLVVLTNQGELHVISLPSIKMLVHYPCIRREDVSGIASCVFT
KYGQGFYLISPSEFERFSLSTRLVVEPRCLVEAPLQMRPKTPSSPVHKDQPDGVPTEHRN
FKTESDRYENSARQVMEHALLNDESVLQEIQKSLEGDQTTFLENNLKTKPKAGNILSNGD
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttcaggcgtcacgggcatgagtctcagagggacaagcacaaacaggatctc
tatcagttcaacaagactgtagaacatggcttcccccatcagcccagcgctctgggattc
agccccagcctggagctcctggccatcggtaccagatcaggagcaatcaaactgtacgga
gctccaggtgtggagttcatgggacttcacgacgagaatgcggcagttacacaggtgcac
ttcctgccaaaccagttggagtttgtcacattactggatgacaacagtctgcacatgtgg
acgcttcgtggacataacagcatgtccgagctgcttgagatgggacgtttcactctctct
ggtccacctggcgcccctcccagcgtgacgcgggtcacggccgtcctggcacactcgtcg
ggtgagctgctgctgctgggcacggagggaggacacgtgtttgttgtagaagtgccaggc
ttcagagaactggaggagaacaacataagcgtggaggatgtacagaacagagttccagag
gattatgttggccgcaggaatctggagtgtgttgaagctctgcatgagaacccgctcaac
ccacggcaggtgctgatcggctacagccgaggcctgatggttctgtgggatctggatcgg
cagcgtcccatacaacactttctcagcacacagcaactagagagtgtttggtggatggag
gatggtgcaaacattctcagttcccatagtgatgggagctactgccagtggacagtcact
ggtgaggatccgcaaacggagcctgagaaacaggagattccatatggtgccttcccctgc
aaggccatatccaaaattatacagctgccatcaaaacaaggtcccccattcctcatcttc
agcggagggatgccgagggccagttacggggacagacactgcatctccgtcatccacagc
aaaacccacgaggcgctggacttcacctcacgtattatcgacttcttcgtcattcgcgag
ggagagaaccacagaggtgagccaagcgctcttgtggttttggtggaggaagaacttgtg
gtggtggatctgcagactgaggggtggcccgtcatccagacgccttacctggtgccatta
cactgttcagccattacctgctcgcaccacgtctcctccatcccactcaaactgtgggaa
agagtgcacgctgcgggagcccagcagagcacacactactctaagaagccttggcctata
aatggaggtcagaatcttgccccagaccctccccagagagacctgctcctcacggggcac
gaagatggcacggtacgtttctgggacgcctcaggggtctgtctttaccccatgtacaag
ctcagcacggcgggagtcttccacacagatgccgacccaaatgacaacatgaaccagggc
agtgagggagagtggcctccgttccgcaaggtgggctgctttgacccatatagcgacgac
cctcggcttggcattcagaagatccatctgtgtaaatacagtggatatctgacagtggct
ggaactgcaggacaaattctggttatggagctgaacgatgaggctgccgagcagatggtt
gaggctacagtggtggacctgctgcagggtcaggagggcttccgctggaagggccaagcg
cgtctagacgtgcgggaggagccggtgctgttccctccaggctttcagcccttcgccctg
gtgcagtgccagccgcccgctgtggtcacggcaatcgctctgcactcagagtggaaactg
gttgcattcggtaccagccatggctttggcctatatgactaccatcagaggaataacgtc
tttgtcaagtgcaccctaaaccccagtgatcagatggccttggaggggccgttgtcacgt
gtcaagtccatcaaaaagtcccttcgacagtccttccgtaggattcgccgcagccgggtc
tccatgcgaaaacaccacactaacaacgcagccaaactgcaggagatcaatgccaggctg
gaggccgaagctctgcaggagatggagttggctcctgtacagagaaagatcgaagcccgt
tcttctgacgactcctttacgggcctcgtcagaacactctacttcgcagatacgtttgtc
agtgatagttctcacagtacaccctcactgtgggcaggaaccaatggcggagctgtcttt
gcgtatgtcctccgtgtgccatcactggaacgaagggcagaggatccagtagtggctcat
gcagctaaagagattcagttgatgcatcgtgctccagtggttggtttggtggtcttggat
ggcaagggctcccctctgcccgagcccttggaggtggcccatgatctggcacgcagtcct
gaaatgcatggttcgcacaatctattggttgtgtcagaggagcaatttaagctgtttacc
ctgcctaaagtgagcagtaagtcaaagctgaagctgacagcagttgacggctctcgtgtg
cgccgtgtgggcgtggcttggtttggctctcggaccgatgaacagctggagagcagcctg
gtggtgctgaccaatcagggtgagctacatgtcatctctctgccctccatcaaaatgctg
gtccactatccttgcatacgaagagaagacgtcagtggaatcgcatcttgtgttttcacc
aaatatggccaaggtttctacctgatctccccatctgagtttgagcggttttctctctcc
acccgcttggtggtggaaccacgctgtctggttgaggctcccctacaaatgaggcccaag
acgccatcaagtcccgtccacaaggaccagccagatggagtgcctactgaacacagaaat
ttcaaaacggagagtgatcgctatgagaattctgctagacaagtaatggagcatgctttg
ctcaacgatgagagtgtgcttcaggagatccagaagtccctagaaggagatcaaacgacg
ttcctagagaacaatctgaagactaagccaaaagcaggcaatatcctgagcaatggagac
tga
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