Squalius cephalus (European chub): 307147274
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Entry
307147274 CDS
T11930
Symbol
psmd11b
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11B
KO
K03036
26S proteasome regulatory subunit N6
Organism
scep Squalius cephalus (European chub)
Pathway
scep03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
307147274 (psmd11b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
scep03051
]
307147274 (psmd11b)
Proteasome [BR:
scep03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
307147274 (psmd11b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
TPR_ESP1
Csm6_6H
DDRGK
YPL108W_C
Motif
Other DBs
NCBI-GeneID:
307147274
NCBI-ProteinID:
XP_079708036
LinkDB
All DBs
Position
19:complement(24622849..24635827)
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AA seq
422 aa
AA seq
DB search
MAAAAVVEFQRAQSLISTDRNASIDILHSIVRRDVHEDDEEAVRVKEQSILELGTLLAKT
GQAAELGGLLKFVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKAE
KRTFLRQALEARLISLYFDTKRYQEALHLGTQLLQELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDCKTAYSYFFEAFEGYD
SIDSPKAVTALKYMLLCKIMLSLPEEVQALISGKLALRYAGRQTDALRCIAQASKNRSLA
DFEKALTEYTKELRDDPIISTHLTKLYDNLLEQNLIRVIEPFSRVQITHIAGLIKLSKDD
VERKLSQMVLDKKFHGILDQGEGVLIIFEEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggcagtggtggagtttcagagggctcagtctctcattagcacagacaga
aacgcttctattgacattttacattcaatagtgagacgggatgtccatgaggatgatgaa
gaggcggttcgtgtcaaggagcaaagcatcctggagctgggcactctcctggctaagacg
ggacaagctgcagagcttggaggcctgctgaagtttgtgaggcctttcctgatctccata
agcaaggcaaaggcagcacggttggtgcgctcgctcctggatctatttctggacatggag
gcagccacgggccaggaggttgagctgtgtctggaatgcattgaatgggctaaagctgag
aagagaaccttcctcagacaggccctagaggctcggctcatttcactctattttgacacc
aagagataccaggaagcccttcatctcggcacccagttgctgcaggagctgaagaagatg
gatgataaagctctgctggtggaagtccagctgctagagagtaaaacctaccacgctctc
agcaaccttcccaaagccagggctgccctcacctcagccaggaccaccgccaatgccatt
tactgtcccccaaagctccaggcagctcttgatatgcagtcaggtatcatccatgcagct
gaggaaaaagattgtaaaactgcctattcttacttcttcgaggcttttgagggctacgat
tccattgacagccccaaggcagtcactgcactgaaatacatgcttctctgcaagatcatg
ctcagcttgccagaggaggtacaggccttgatcagtggcaaactggctctgcgatatgct
gggcgacagaccgatgcactgagatgtatagcacaagccagcaagaacagatcattagca
gattttgaaaaggccctgacagagtacactaaagagctgagggacgaccctatcatcagc
acgcatttgaccaagctttacgacaatttgctggaacagaacctcattcgggtcattgag
cctttttccagagtacagattacacatatagctggtctcatcaaactctcaaaggatgat
gttgagaggaaactgtcacaaatggtcctggacaaaaagtttcatggcatccttgaccaa
ggtgaaggagtgctcatcatatttgaggagccgcctgtggacaagacttacgaggcagct
ctagaaaccatacagaacatgagcaaagttgtggattcactgtacaacaaggctaagaag
ttaacatag
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