Squalius cephalus (European chub): 307147280
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Entry
307147280 CDS
T11930
Symbol
gabrz
Name
(RefSeq) gamma-aminobutyric acid type A receptor subunit zeta isoform 1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
scep Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
scep04082
Neuroactive ligand signaling
scep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307147280 (gabrz)
04082 Neuroactive ligand signaling
307147280 (gabrz)
04519 Cadherin signaling
307147280 (gabrz)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307147280 (gabrz)
Ion channels [BR:
scep04040
]
Ligand-gated channels
GABA-A
307147280 (gabrz)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
307147280
NCBI-ProteinID:
XP_079708043
LinkDB
All DBs
Position
19:24991967..25020380
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AA seq
451 aa
AA seq
DB search
MTRNAQAAMHLCSSLLLLLFISRIIDGSVASTEEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFDGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACSMDLTKYPMDRQTCMLQLESW
GYNVKDVVFYWTRGNQSVSGLDHLQLAQYTLEDHYTSESEAVYETGNYPKLIFHFKLKRS
ILYFILETYVPSSALVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLHQPNAANAYMYGQEMQEREEEMNGIVNSI
GSRALRARKREEMLSRMGSTSNPTPSESKEEINSQPETRCTKCMSTTRRIIRCLNCCKVE
NPHYIDNYSRLSFPLSFIFINLLYWTYYLYF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtaacgctcaagcagccatgcatttgtgtagctctttgctgctcctccttttc
atcagcaggatcattgatggctctgtcgccagcacggaggagattttgcctcccaccatt
cagaaactgatgaagggatacaacaaataccttaggccattctttgacaatggccctgtt
actgtaggcatgagtctggatatcgccagcatagacaccatatcagaaatcaacatggat
tacacagccaccatctttcttcgtcagcgctggacagatgaacgcttgtgttttgatggc
aataagagcttgagtctggatgggagacttgtggaactcctttgggtccctgatacattc
attgtggattccaagaaatccttcctgcatgacatcactgtcgaaaacagactgatccgg
atatttcccaacggaactgtgctgtatgccctgagaattaccaccacggtggcctgcagt
atggatctaaccaaatatcccatggacaggcagacgtgcatgcttcaacttgaaagctgg
ggatataacgtgaaagatgttgttttctactggacacggggaaaccaatcagttagcggt
cttgatcatttacagctggctcagtacacccttgaggaccactatacctctgaatctgaa
gccgtttacgagactggtaactacccaaagttgatcttccacttcaaactcaagcggagc
atcttatatttcattctggagacgtatgttccttccagtgctctggtggtcctgtcctgg
gtctcattttggatcagtcagtcttctgtacctgctcgcatttgcataggagtgaccaca
gtcttgactatgaccaccttgatgatgggggcccgtacctctctacccaatgccaactgc
ttcattaaagccatcgatgtgtatctgggcatctgcttcagcttcatctttggcgcactg
attgaatatgcagttgctcatttctgcacgttacaccagccgaatgctgccaatgcatat
atgtatggccaggaaatgcaggagcgcgaggaagagatgaacggcatcgtcaattccatc
ggcagccgcgctttgcgggcccgtaaacgggaggagatgctgtcccggatgggcagcacc
agcaaccccacccccagtgagagtaaggaggagatcaactcgcagccagagacccgctgc
accaagtgcatgtcgacgacacgccgtatcatacgctgtctgaactgctgcaaagtggag
aacccgcactacatcgacaactactcacggctgtccttccccctctccttcatcttcatc
aacctcctctactggacctactacttgtacttctaa
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