Squalius cephalus (European chub): 307147704
Help
Entry
307147704 CDS
T11930
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00330
Arginine and proline metabolism
scep00480
Glutathione metabolism
scep01100
Metabolic pathways
scep04148
Efferocytosis
Module
scep_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
307147704 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
307147704 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
307147704 (odc1)
Enzymes [BR:
scep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
307147704 (odc1)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307147704
NCBI-ProteinID:
XP_079708743
LinkDB
All DBs
Position
20:5684504..5690514
Genome browser
AA seq
460 aa
AA seq
DB search
MTTLTGSDFDFTFLEEGFCARDIVEQKINESSLSDDKDAFYVADLGDVLKKHLRWLRVLP
RITPFYAVKCNDSRAVVTTLASLGAGFDCASKTEIQLVQSVGVDSSRIIYANPCKQVSQI
KYASAHGVQMMTFDSDVELMKVARCHDSAKLVLRIATDDSKAVCRLSVKFGATLKTSRLL
LERAKELGLDVIGVSFHVGSGCTDSETYRQAISDARCVFDMGAELGYNMTLLDIGGGFPG
SDDTKLKFEEIAAVINPALDKYFPADSGVRIISEPGRFYVASAYTLAVNIIAKKVIMKEQ
SASDEEEDGTNDRTLMYYVNDGVYGSFNCILYDHAHVLPTLHKKPKPDERMYPCSIWGPT
CDGLDRIVEQCSLPDMQVGDWLLFENMGAYTVAASSTFNGFQKPDIYYIMSRTAWQCMQQ
IREQGIPLPAEEQSTGNMPSHCGRESTLDVPAKPSPTHVL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactgactggatcagactttgacttcaccttcctggaggagggattctgtgca
cgggatatcgtggaacagaagatcaacgagtcgtccttatcggatgacaaagatgccttc
tacgtggctgacctgggtgacgtcctgaagaagcacctccgttggttgcgcgttttaccc
agaatcactccgttctacgcagtgaagtgcaacgacagcagggctgttgtcacaacgctg
gcgtctctgggagcgggattcgactgtgcgagcaagacggagatccagctcgtgcagtct
gtgggtgtggactccagcaggatcatctatgctaacccctgcaagcaggtgtctcagatc
aaatacgcctcggctcacggcgtgcagatgatgacgtttgacagcgacgtggagctcatg
aaggttgcacgatgccatgatagtgccaaactggttctccgtatcgccactgacgactcc
aaggccgtgtgcaggttaagtgtgaagtttggtgccacgttaaagaccagccggctgttg
ctggagagggcgaaggagcttgggctggatgtgatcggagtcagtttccatgtgggaagc
ggatgcactgattctgagacgtacaggcaggccatctcagatgcacgctgtgtttttgac
atgggggcggagctgggatataacatgaccctgcttgatattggcggaggctttccaggc
tcagatgacaccaaactgaaatttgaagagatcgccgctgtgatcaaccctgcactggat
aaatacttccctgctgactccggcgtgaggatcatttctgaacccggccgcttttacgtg
gcgtctgcatacacgctggcggtcaacatcattgccaaaaaggtcatcatgaaggagcaa
tcagcctctgacgaagaagaggatgggaccaatgaccgaaccttgatgtactacgtgaat
gatggcgtttatggttccttcaactgcattctgtacgaccatgcgcatgtcttgcccact
ctgcacaagaaacccaagcctgatgagcgcatgtacccatgcagtatttggggacccacc
tgtgatgggctcgaccgcattgtggagcagtgcagcctgccggacatgcaggtgggcgac
tggctgctgttcgagaacatgggtgcctacactgtagccgcgtcctccaccttcaatggc
ttccagaaacccgacatttattacatcatgtcccgaaccgcctggcagtgcatgcagcag
atccgtgagcaggggattcctcttcccgccgaggagcaaagcactggaaacatgccatct
cactgcggtcgcgagagcaccctggacgtgccggccaagccaagcccgactcacgtgctg
tga
DBGET
integrated database retrieval system