Squalius cephalus (European chub): 307147709
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Entry
307147709 CDS
T11930
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2 isoform 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
scep Squalius cephalus (European chub)
Pathway
scep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
307147709 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307147709 (tbpl2)
03021 Transcription machinery [BR:
scep03021
]
307147709 (tbpl2)
Transcription factors [BR:
scep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
307147709 (tbpl2)
Transcription machinery [BR:
scep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
307147709 (tbpl2)
RNA polymerase III system
TFIIIB
307147709 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
307147709 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Auxin_repressed
Motif
Other DBs
NCBI-GeneID:
307147709
NCBI-ProteinID:
XP_079708755
LinkDB
All DBs
Position
20:12447663..12450459
Genome browser
AA seq
310 aa
AA seq
DB search
MDEEAALENYFDHTLGSSDYIFEGDLGLQGPATQLQDSSFLSSLTSQEKDLTEDLDLSFL
PDELSTQDEPPQAENDTRNEDSGVYTDCPPRESTEADTDTSNFAKNTSQFSLPMTPMTPM
TPMTPVTESSGIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRT
TALIFSSGKMVCTGAKSSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPI
RLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENI
YPILKGFRKQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaggcagccctcgaaaattactttgaccatactcttggttcatctgattac
atctttgagggggatctgggcctacagggtcctgctactcagctccaggattcctctttc
ctgtcctctttaacttctcaggagaaagatctcactgaggacttggacctgagcttctta
cctgatgaactgagcactcaagatgagccgccacaggctgagaatgacaccaggaatgag
gacagtggcgtttacaccgactgtccaccgagagagtcgacagaggcagatactgacacc
agtaattttgccaaaaacacctcacagttcagtctcccgatgactcccatgactcctatg
acccccatgaccccagtgaccgagagttcaggcatcatcccacaattacagaatattgtg
tcaacagtgaatcttgcttgtcctctggatctcaaatccattgcacttcaagctcgaaat
gcagaatacaacccaaagcgttttgctgcagttataatgaggatccgtgaaccaagaact
accgctctcattttcagctctggaaaaatggtctgcactggagccaagagcagtgaggag
caatctcgccttgctgcacggaaatatgcccgggtggtacagaaactgggtttccctgcc
aaattccttgacttcaaaatccaaaacatggttggaagttgtgatgtctgctttcctata
cgtttagaaggcctggtcctcactcaccagcagttcagcagctatgagccggagttgttt
cctggcttgatatatcgcatggtgaagccacgtattgtgctgctgatttttgtatctgga
aaagttgtgctcacaggtgcgaaagagcgggcagagatctatgaagcctttgaaaatatt
taccccatcctgaaagggttcaggaagcagtag
DBGET
integrated database retrieval system
