Squalius cephalus (European chub): 307148072
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Entry
307148072 CDS
T11930
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307148072 (otx1)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
307148072 (otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
307148072
NCBI-ProteinID:
XP_079709392
LinkDB
All DBs
Position
20:20301730..20307404
Genome browser
AA seq
324 aa
AA seq
DB search
MMSYLKQPPYAMNGLGLSGAAMDLLHPSVGYPATPRKQRRERTTFTRSQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSTKARPAKKKSSPTRESTG
SESSGQFTPPAVSSAGSSSSSSSSTTNNTGISSTSTSISTVSSIWSPAISPGSAPPSVSL
PEPVAPSNTSCMQRSVSGTAGSSYPMPYNQTTGYSQGYPTPSGSYFSGVDCGSYLAPMHS
HHHPHQLSPMAASSMSTHPHHHISQSSGHHHHHHHQAYSGTGLAFNSSDCLDYKEQTASS
WKLNFNTTDCLDYKDQASWRFQVL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccctacgccatgaacggcctggggctgagcggtgcg
gccatggacctactgcacccgtccgtcggatacccagcgacgcccagaaagcagcggcgg
gaaagaacgacatttacgcgctcacagcttgacattctcgaatcgctctttgccaaaact
cgttatccggacatatttatgagagaggaggtggcactgaagatcaaccttcctgagtcc
agagttcaggtgtggtttaagaatcgtcgtgctaaatgtcgccagcagcagcagagtggc
agcagcactaaagctcggcccgcgaagaagaaatcctcgcccacccgggagagcacaggc
tccgagagcagcggccagttcacccctccggcagtctccagtgctggctcttcctcctcc
tcctcttcctccaccaccaataacacaggcatcagtagcacctctacctctatcagtact
gtctcctcaatctggagccctgccatttctccaggctccgcacccccgtccgtctccctg
ccggagcccgtcgctccctcaaacacctcctgcatgcagcgctctgtctcaggcacggcc
ggctcctcctaccccatgccctacaaccagaccaccggctacagccagggctacccgact
ccttccggttcttacttcagtggggtggactgtggctcctatctggcccccatgcactct
caccaccaccctcaccagctcagccccatggcagcttcgtccatgtccacgcacccccac
caccacatcagtcagtcctcaggacatcaccaccaccatcaccaccaggcctacagtggc
actggcctggccttcaattcttctgactgcctggattacaaggagcaaacggcctcctcc
tggaagctcaacttcaacactacagactgtttggactacaaagaccaagcatcctggagg
ttccaagtcttgtga
DBGET
integrated database retrieval system
