Squalius cephalus (European chub): 307148682
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Entry
307148682 CDS
T11930
Symbol
rragd
Name
(RefSeq) ras-related GTP-binding protein D
KO
K16186
Ras-related GTP-binding protein C/D
Organism
scep Squalius cephalus (European chub)
Pathway
scep04140
Autophagy - animal
scep04142
Lysosome biogenesis
scep04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
307148682 (rragd)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
307148682 (rragd)
04140 Autophagy - animal
307148682 (rragd)
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Paralog
GFIT
Motif
Pfam:
Gtr1_RagA
Arf
Roc
SRPRB
MMR_HSR1
Ras
HTH_33
AAA_14
Ubiquitin_UBP8
Motif
Other DBs
NCBI-GeneID:
307148682
NCBI-ProteinID:
XP_079710507
LinkDB
All DBs
Position
20:15105004..15124818
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AA seq
419 aa
AA seq
DB search
MAWPYQVTMWKSLAASSDKISQTLRMTSERNYNEVDGENEALSFGYYDDDDDFDTFTDGD
GDCGCDEGVLGFSDPFSSEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIC
REDVSNSSFVSFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDYVEALSRLHLT
VTRAYKVNPDINFEVFIHKVDGLSDDHKIEKQRDIHKRANDDLADAGLERIHLSFYLTSI
YDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQ
TYELCCDMIDVVIDISCIYGLTGDEAGTPYDKDSMAIIHLNNTTVMYLKEVTKFLALVCF
LREENFERKGLIDYNFHCFKKAIEEVFDVRLKVQRSRKLLSQRRWSRQTVPNGTQVHPY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcttggccatatcaggtgacaatgtggaaaagtttggctgcctcctcagataaaatt
tctcaaactctgagaatgacaagcgaaaggaactacaatgaagtggacggagaaaacgaa
gcgctgtcgttcggatattatgacgacgatgatgatttcgacacattcactgacggggac
ggagactgcggctgtgatgaaggagtgctggggttcagtgatccgttcagcagtgaggtg
aaacctcggatcctgctcatgggcctgaggcgaagtggcaagtcttccattcagaaggtt
gtattccacaagatgtcacccaacgagactctctttctggagagcaccaataagatttgc
cgagaggatgtttccaacagttcctttgtcagcttccaaatctgggactttcctggtcag
attgatttcttcgaccccacattcgactatgagatgatatttcgtggcacaggggctctc
atctttgtcatagactctcaggatgattatgtggaggctctgagtagacttcacctcact
gtgacaagagcctacaaggtcaatccagatatcaactttgaggtgttcatccacaaggtg
gatgggctgtcagatgaccacaagattgagaaacagagggacattcacaaacgagccaat
gatgatctagccgatgctggtttagaaagaatacacttaagtttctacttgacaagcatc
tatgatcattcaatctttgaggctttcagtaaagttgtgcagaaactcatccctcaactt
cccacccttgagaatctgcttaacattttcatatctaattcagggattgaaaaggctttt
ctctttgatgtggttagtaagatttacatagcaaccgacagcagccctgtggacatgcag
acctacgagttgtgttgtgacatgatagatgtggttatcgacatctcgtgcatctatgga
ttgaccggagatgaggcaggaactccatatgataaagactccatggccataatccacttg
aacaacactacagtcatgtacctaaaagaggtcaccaagtttcttgccctggtgtgtttc
ctcagggaagagaattttgagaggaaaggacttatcgactacaatttccactgtttcaag
aaagccatagaggaggtgtttgacgtgcgcttgaaagtgcagaggagtcggaagcttctg
agccagaggaggtggagcagacagaccgtgccaaacgggactcaggtgcatccttattga
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