Squalius cephalus (European chub): 307148691
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Entry
307148691 CDS
T11930
Symbol
prox1a
Name
(RefSeq) prospero homeobox protein 1a
KO
K20211
prospero homeobox 1
Organism
scep
Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307148691 (prox1a)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
307148691 (prox1a)
SSDB
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Paralog
GFIT
Motif
Pfam:
HPD
NifQ
Motif
Other DBs
NCBI-GeneID:
307148691
NCBI-ProteinID:
XP_079710528
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Position
20:complement(25576191..25611474)
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AA seq
738 aa
AA seq
DB search
MPDHDSTSLLSRQTKRRRVDIGVKRTVGQTSVVFTRTKATFFSAMNPHGSEQDVECSVVQ
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG
SEIQQEDACSNSSRGSPQECLSPFNRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP
SVTLRAGDNEREGAAQPSSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK
LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNISEDSMRSDGMDNRAHDSVPDRSDNEM
SDLDPGHFLDRARALIREQNMMAEGDKPKRDGSRGKSQGPTSMHAEGKQLAETLKQELNT
AMSQVVDTVVKVFAKPPRPVPQVFPPLQMPPDRFAVNGENPNFHTANQRLQCFGDVIIPN
PLDTFASMQVHNSNDQTEALPLVVRKNSSDQTGSLPTPGGHHHHSLHPSPLSSAMGFSPP
SFRHPFPLPLMGYPFQSPLGGPTGHYPGKDRSSPESLDLSRETTSLRTKMSSNHLSHHRS
MSPTHPGNEGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYTRYPS
SNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQSINDGVTGVEELSVSRDC
ELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVICKLDS
EVPEIFKSPNCLQELLHE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccatgacagcacatccctcttaagcagacaaaccaagagacgaagagttgac
ataggagtgaagaggactgttgggcaaacatctgtggtttttacccgcacaaaagcaacc
ttttttagtgccatgaatccccacggttccgagcaagatgttgagtgttcagtggtgcag
cacgcagacggcgagaagtccaacgtgcttcgcaagctgttgaagagggcgaactcttac
gaagacgctatgatgccctttccgggggcaactatcatctcccagcttctgaaaaacaat
ttgaccaaaaatggaggcagtgagcctaatttccagggaagtggcctctcgagcaccggt
tcagagatccagcaggaggacgcttgcagcaactcctcgcggggcagccctcaggagtgc
ctttcaccattcaacaggccctcgatgacccaatttgaaatggagaggcttacagatgag
catcttagggccaaacgagcccgggtggaaaacatcatccgtgggatgagccattctcca
agcgtcacgctccgtgcaggtgataacgagcgcgagggggcagcccagccctcgagtcct
cgtgagaactaccgggaaaacaagcgcaagcagaaactgccacagcagcagcagcagagt
ttccagcaactcgtctctgcccgcaaagagcagaaacacgaggaacgccggcaactgaaa
ctacagctagaggacatgcagaagcagctccggcaactgcaagagaagttctaccagatt
tatgacagcactgactctgaaaatgatgaagatggaaacatctctgaagacagcatgcgt
tctgatggaatggacaatcgtgcccacgactcggtcccagatcgctccgacaacgagatg
tctgacctggatccagggcacttcttggatcgagcacgcgcacttattcgggagcagaac
atgatggcggagggggacaaacccaagcgtgatgggtcacgaggaaagagccagggacca
acctccatgcatgcagagggcaaacagctagcagagacgctaaaacaagagctcaataca
gcaatgtcccaggtagtggacaccgtggtgaaggtctttgccaagcctccacgcccagtt
cctcaggttttcccacccctgcagatgccccctgatcgtttcgcagtcaatggagaaaac
ccaaacttccatactgccaaccagcgcttgcaatgtttcggtgatgtcatcattcctaat
cccctggacacttttgctagtatgcaggtgcacaactcgaatgaccaaacggaggccctg
cctttggtagtgagaaagaactcttcagatcagactgggtctcttcccacacctgggggt
caccaccaccattccctgcacccctcacccttatcttccgcaatgggctttagtcctccc
tctttccgccatcctttcccccttcctctaatgggctaccctttccagagccccttaggt
ggcccaacagggcattacccaggaaaggataggtcttctcccgagtctctggatttgtcc
agagagaccaccagcctacggaccaagatgtcgtccaaccacctcagccaccatcgttcc
atgtcaccaacacacccagggaatgaaggcttgtccttgtccctcatcaagtcagagtgc
ggagaccttcaggacatgtctgacatctccccatattcaggaagtacaatccaagagggg
ctttctccgaaccatctgaagaaggccaagctgatgttcttctacacacgctaccccagc
tccaacatgctgaagatgttcttctcagacgtgaagttcaaccgctgcatcacatcacag
ctgatcaagtggttcagtaacttccgtgagttttactacatccagatggagaaatttgct
cggcagtccatcaacgacggtgtgacaggggtagaagagctgagcgtgagccgggactgc
gagcttttccgcgctctcaacatgcactacaacaaggccaacgactttgaggttccggag
cgattcctggaagtggcacagatcacgttacgggagtttttcaatgccattgtggcaggc
aaagatgttgatccttcctggaagaaggccatatacaaggtcatctgcaagctggacagt
gaggtcccagagattttcaaatctcccaattgtctgcaggagcttctgcatgagtag
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