Squalius cephalus (European chub): 307148702
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Entry
307148702 CDS
T11930
Symbol
wars1
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
307148702 (wars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scep01007
]
307148702 (wars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scep03016
]
307148702 (wars1)
Enzymes [BR:
scep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
307148702 (wars1)
Amino acid related enzymes [BR:
scep01007
]
Aminoacyl-tRNA synthetase
Class I (G)
307148702 (wars1)
Transfer RNA biogenesis [BR:
scep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
307148702 (wars1)
Prokaryotic type
307148702 (wars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
307148702
NCBI-ProteinID:
XP_079710543
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All DBs
Position
20:complement(35606984..35621534)
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AA seq
462 aa
AA seq
DB search
MSSPMDLYEQLTAQGLAVRHIKAQKGNKADVESAVQLLLRMKEDYKLLTGQDYQAGRPPT
HTEDEDGPAEDDEDDQVDPWNVSTSSAKGVDYDKLIVRFGSCKIEQELVDRIARVTGKTP
HHFLRRGIFFSHRDMHQILDAYESRKSFYLYTGRGPSSGAMHVGHLIPFLFTKWLQDVFD
VPLVVQMTDDEKYLWKDLSLEDCHRYTLENARDIIACGFDPDKTFIFSDLDYMGASPSFY
RNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFGDRNDVQCLIP
CAIDQDPYFRMTRDVAPRIGYLKPALLHSTFFPALQGAQTKMSASDANSSIFLTDTAKQI
KNKVNKHAFSGGKDTVEEHRKLGGNPDVDVSFMYLTFFLEDDEQLEKIRQDYRSGALLTG
ELKKCLIETLQPMIAAHQERRKLVTDETVRQFMTPRKLHFNC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcccgatggacctgtacgagcagctgacggcgcagggactcgcagtgaggcac
atcaaggctcagaagggcaataaagctgatgtggagtctgcagtgcagctgctgctgagg
atgaaggaggactataagcttctcaccggtcaggattatcaggccggacgcccgccgaca
cacactgaggatgaggatggtcctgctgaggatgatgaagatgatcaggtcgacccctgg
aacgtgtccaccagcagcgctaaaggagtcgactacgacaaactcatcgtgcgattcggc
agctgtaagatcgagcaggaactggtagacaggatcgctcgagtcacggggaagacaccg
catcacttcctgcgcagaggaatcttcttctcacacagggacatgcatcagatcctggac
gcgtacgagagccggaagtccttctatctttatacgggtcgtggaccgtcctctggggcc
atgcatgtgggacacttgatccccttcctcttcaccaagtggcttcaggacgtgtttgat
gttcctctggtggttcagatgactgatgatgagaagtatctgtggaaggatctgtcgctg
gaggattgtcatcgatacacactggagaacgctagagacatcatcgcctgcgggttcgac
ccggacaagaccttcatcttctccgatctcgactatatgggggcgagtccttcgttctac
agaaacgtggtgaaggtccagaagcatgtgacgtttaaccaggtcaaaggcatcttcggg
ttcacagacagtgactgtatcggtaaaatcagtttcccggccattcaagcggctccgtcc
ttcagcaactctttcccgcagatcttcggtgacaggaatgacgttcagtgtctcattccg
tgtgccatcgatcaggatccgtatttccggatgacgcgagacgtagctccgcggatcggc
tatctgaagccggctctgcttcactccacgttcttcccggcgcttcagggcgcgcagacc
aagatgagcgctagcgacgccaactcctccatcttcctcacggacacggccaaacagatc
aagaacaaggtcaacaaacacgcgttctccggcgggaaggacacggtcgaggaacaccgg
aagctcggggggaatcccgatgtggacgtttccttcatgtatctgacgttcttcctggaa
gacgatgaacagctggagaagatccgacaggactacaggagcggtgcgcttctcaccggc
gaactgaagaagtgtttgatcgagacgcttcagcccatgatcgcagcgcatcaggagaga
cgcaagctagtgaccgacgagaccgtgcgacagttcatgaccccgcgcaaactacacttc
aactgctag
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