Squalius cephalus (European chub): 307149117
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Entry
307149117 CDS
T11930
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
scep
Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307149117 (tial1)
03041 Spliceosome [BR:
scep03041
]
307149117 (tial1)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
307149117 (tial1)
Spliceosome [BR:
scep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
307149117 (tial1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Rodlin
Motif
Other DBs
NCBI-GeneID:
307149117
NCBI-ProteinID:
XP_079711327
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All DBs
Position
21:22335595..22342822
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AA seq
388 aa
AA seq
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MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEQSDSSRKVNSSIGFSVLQ
QTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSVQENSSKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQ
TFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAK
NVQPMEYGQWGHWNQMYSNPQQYGQYMTNGWQVPSYGMYGQTWNQQGFGVEQSQSPAWVG
GFGTQPSQAQPGQVLNQANFGMAGYQTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagagccacccaaaaaccctctacgtggggaatctttcaagagatgtaacc
gagaacttgatccttcagttatttactcagattgggccatgtaaaagttgtaaaatgata
acagagcaatccgatagcagcaggaaggtgaactcttctattggattttctgttttgcag
caaacaagcaatgatccgtattgctttgtggaattctttgaacacagagacgctgctgct
gctttagccgccatgaacggaaggaagattttgggaaaggaagtcaaggtaaattgggcg
actactcctagcagtcagaagaaagatacatctaatcactttcatgtttttgtgggagat
ttgagccctgaaatcacaactgatgacatcagagctgcatttgcaccctttgggaaaatc
tcggatgcacgagtggtgaaggatatgacaacagggaaatcaaaggggtatggatttgtg
tccttctataacaaactggatgctgagaatgctatagtacacatgggcggtcagtggctt
ggtggacggcaaatccggactaactgggctactcggaaaccacctgcccccaagagtgtg
caagaaaacagctccaagcagcttaggtttgatgaggtggtgaaccagtcgagtcctcag
aactgcacagtgtactgcgggggcattcagtcaggtctcacagaacaccttatgcgacag
acgttttctcctttcggacagataatggagatcagagttttcccagagaagggttattcg
tttatcaggttctcctctcatgaaagtgctgctcatgccatcgtctcagtgaatggtacc
accatcgaaggtcatgttgtgaagtgctactggggcaaagagtcacctgacatggccaaa
aatgtccaaccgatggagtacggtcagtggggacattggaatcaaatgtacagcaatcct
caacaatacggtcagtacatgacgaatggctggcaagtaccatcctatggaatgtatgga
caaacatggaatcagcaaggatttggtgtagaacaatcacagtctcctgcctgggtggga
ggctttgggacacaaccctctcaggctcagcctggccaagtgttgaaccaggctaacttt
ggcatggccgggtaccagacacagtga
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integrated database retrieval system
