Squalius cephalus (European chub): 307149344
Help
Entry
307149344 CDS
T11930
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform 1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
scep Squalius cephalus (European chub)
Pathway
scep04080
Neuroactive ligand-receptor interaction
scep04082
Neuroactive ligand signaling
scep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
307149344 (gabrg1)
04082 Neuroactive ligand signaling
307149344 (gabrg1)
04519 Cadherin signaling
307149344 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307149344 (gabrg1)
Ion channels [BR:
scep04040
]
Ligand-gated channels
GABA-A
307149344 (gabrg1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
307149344
NCBI-ProteinID:
XP_079711740
LinkDB
All DBs
Position
21:26648835..26658485
Genome browser
AA seq
457 aa
AA seq
DB search
MVLLHRRRRKEALVWLLPGLLGVCMAFGPSKAEEEDYEDVPINKTWVLSPKVYESDVTFI
LNKLLQGYDNKLRPDIGVRPTVIEAAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFN
SSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAE
CYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRWQRRSVEVADQRFWRLYQFAFVGLRNTS
DVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGI
TTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRPKKKTK
SSHAQKPSAVNIRPGTSLLQLNNIAPYHDDDDDYAYECLDGKDCASFFCCFDDCRSGAWR
ENRMHVHVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggttctgctgcatcgccgccggagaaaagaagcactggtttggctgttgcccggtctg
cttggagtctgcatggcatttggcccaagcaaagcagaggaggaagattatgaggatgtc
cccatcaataaaacatgggttttatcaccaaaagtctacgagagcgacgtcacctttatc
ctaaacaaattgctgcaaggttacgacaacaaactgagaccagatatcggagtgagaccg
actgtgattgaggcggcagtgtacgtgaacagcattggcccggtagatcccatcaatatg
gagtacaccatcgacatcttctttgctcagacgtggtacgacagcagactcaaatttaac
agctcaatgaaagtcctcatgctcaacagcaacatggtgggaaaaatctggatccctgac
acgtttttccgcaactcgcgtaaatctgacgcccactggatcacgacaccgaatcgcctt
cttcggctctggagcaatggaagagtgatgtatactctaaggttgactattaatgcggaa
tgctaccttaagctgcataactttcccatggatgaacattcgtgccctctggagttttca
agctatgggtatccaaagaatgagatccagtatagatggcagcgtcgttcggttgaagtt
gcagaccagcgcttctggaggctttaccagtttgcctttgtgggcctacggaacacttct
gatgttgcaaacactcagtctggagaatacgtggttatgactattttctttgacctgagt
cggagaatgggctacttcaccatccagacctacatcccctgcagtatgattgtggttttg
tcctgggtctctttctggattaacaaggatgctgtacctgccagaacatctttaggtatc
acaactgtgcttaccatgacaaccctaagcaccatatcgaggaagtccttgccaaaggtg
tcgtacgtgacagccatggatctatttgtgtctgtctgcttcatcttcacctttgctgct
ctaatggaatatgggactctacattatttcacaagcaatcgaccgaaaaagaagaccaaa
tcaagccatgcacagaaacccagcgcggttaacatcagaccagggacatctctgctgcag
ttgaacaatattgctccctaccatgacgatgatgatgattatgcgtatgaatgtctggac
gggaaagactgcgccagtttcttctgctgctttgatgattgtcgctccggagcttggcgt
gagaacagaatgcatgtccatgtctccaaaatcgactcctactcccgaatattcttccca
accgcctttggcctcttcaatcttgtctactggattggatatctgtatctttag
DBGET
integrated database retrieval system
