Squalius cephalus (European chub): 307149999
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Entry
307149999 CDS
T11930
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform 1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
scep Squalius cephalus (European chub)
Pathway
scep04020
Calcium signaling pathway
scep04260
Cardiac muscle contraction
scep04261
Adrenergic signaling in cardiomyocytes
scep04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
307149999 (slc8a1a)
04020 Calcium signaling pathway
307149999 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
307149999 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
307149999 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scep02000
]
307149999 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
scep00536
]
307149999 (slc8a1a)
Transporters [BR:
scep02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
307149999 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
scep00536
]
Heparan sulfate / Heparin
Others
307149999 (slc8a1a)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307149999
NCBI-ProteinID:
XP_079712842
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Position
22:complement(25009153..25056102)
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AA seq
970 aa
AA seq
DB search
MGQSGTSYCFSLALNLIIFLLVFSNELMPATAGGSKTSLDVDTSPNETSSHDACGGSFEC
KEGVILPIWMPNNPSFGDKLARATVYFVGLFYMFLGVSIIADRFMASIEVITSQEKEITI
KKPNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFNAGELGPNTIVGSA
AFNMFVIIGLCVSVIPEGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVEVWEG
LLTLFFFPICVLFAWVADRRLLFYKYVYKRYRVGKQRGMIIETEGEPELQSKADIEMDGG
MLNSHGEEFLDGTVDIEDKDMDEDEARREMVRILKELKQKHPEKEMEQLVELANYHVLSQ
QQKSRAFYRCQATRLMTGAGNILKKHAADQARKALGIHELRSEVSDNDISSKIFFDPGTY
QCLENCGTVALNVVRRGGDLTSTVSVEYRTEDGTANAGSDYQFTEGVIFFKPGETEKEIR
VDIIDDDIFEEDEHFLVHLSNVKVISEGTDNGNPGANHVDTLAGLGLPSTATVTIFDDDH
AGIFTFEEPMVHVSESIGTMEVKVARTSGARGVVVIPYKTTEGTAKGGGEDFEDTHGVLE
FQNDEISKTIQINIIDDEEYEKNKNFFLEIGEPQMVEMSERKAMLLHECGGFVKTGRDVY
RKVQGRDKPIPSTIISITEDGEEDTLTKKEKDERRVAEMGRPTLGEHVKLEVIIEESYEF
KSTVDKLIKKTNLALLIGTNSWRDQFVEAITVSSGADDDEECGEEKMPSCFDYVMHFLTV
FWKVLFAFVPPTDYWNGWACFIVSIIMIGVLTAFIGDIASHFGCTIGLKDSVTAVVFVAL
GTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAVYHQAKGEYFRVQ
PGTLAFSVTLFTIFAFICVAVLMYRRRPEIGGELGGPRTPKILTTTLFFSLWLMYIIFSS
MEAYCIIKGF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggccaatctgggacttcatactgtttttctctcgctctaaacctcatcatcttcctc
ttagttttctccaatgagcttatgccagctactgcaggcggctctaaaacaagcttagat
gtagatacttctcctaacgaaacctcttcacacgatgcatgtggtggtagttttgagtgc
aaagagggagtgatcttgccaatttggatgccaaacaacccgtcttttggggataagttg
gccagagccactgtgtactttgttggtttgttctacatgtttcttggggtatccatcatt
gcagaccgctttatggcttccattgaggtcatcacatcccaggagaaagagatcaccatc
aagaagccaaatggagaaaccacaaccactactgttcgtatttggaatgaaactgtctcg
aatcttactctcatggctctgggttcatcagccccagaaattctgctctccgtggtagaa
gtgtgtggacacaactttaacgcaggcgagctaggcccaaacaccattgttggaagtgca
gcttttaatatgtttgtcatcatcggcctctgtgtctctgtgataccagaaggagagcat
cggaaggtcaagcatctgcgggtgttttttgtcaccgccacttggagtatctttgcatat
acatggctttatctgatcttggcggtgatttccccaggtatcgtggaagtctgggaggga
ctgcttactctttttttctttccaatttgtgtcctttttgcttgggttgcagaccgcaga
cttcttttctacaagtatgtgtacaaacgttacagagtcggaaaacaaagggggatgatc
atcgagaccgaaggtgagccggagctccagtcaaaggctgatatcgaaatggacggcggg
atgcttaactctcacggcgaggagttcttagacggaacggtggatattgaagataaagac
atggatgaggatgaggccagaagagaaatggtaaggatattgaaggaactgaaacagaaa
catccggaaaaagagatggagcagctggttgagctcgccaactaccacgtcctcagccag
cagcagaagagtcgtgctttctatcgctgccaggccactagacttatgactggggcgggt
aatatcctaaaaaaacatgctgcggaccaagccagaaaagcacttggcatccatgaactt
cgctcagaagtctcagataatgatatttcgtccaagattttttttgaccctggcacatat
cagtgtcttgagaactgcggaactgtggctttgaatgtagtacgacgtggcggcgactta
actagcactgtttcggtggagtaccgtactgaggacggcactgccaatgcagggtctgat
taccagttcacagagggtgttatattcttcaaaccaggtgaaactgaaaaggagataaga
gtggacatcattgacgatgacatttttgaagaagacgaacacttcctggtccatctcagc
aacgtcaaagtcatatctgaaggaaccgacaatgggaacccaggcgccaatcatgtggac
acattagctggtcttggccttccttcaactgctactgtgactatctttgatgatgatcat
gctggcatcttcacatttgaggaaccaatggttcatgtcagtgaaagcattggtacgatg
gaggtgaaggtggcacgtacctctggagcccgtggagtagtggtaataccctataaaaca
actgaaggcacagcaaaaggtggaggagaggactttgaagatactcatggtgtcttggag
ttccagaatgatgagatttccaaaactattcagatcaatataatcgatgacgaggagtat
gaaaagaataagaacttcttcctggagattggagagccacaaatggtggaaatgagtgag
agaaaagctatgttgctgcatgaatgtggtggattcgtgaaaacaggcagggatgtgtac
cggaaagtgcagggtagagacaagccaatcccctccaccattatcagcatcacagaggat
ggggaagaggacaccctgactaaaaaagagaaggatgagaggcgtgttgctgagatggga
cgcccgacactgggtgaacatgttaaacttgaagtaatcattgaggagtcctatgaattt
aagagcacagtcgacaaactcataaagaaaaccaacttggcccttttgattggaaccaac
agttggagagaccagtttgtagaagccatcactgtcagctcaggggcagatgatgatgaa
gagtgtggggaagaaaagatgccatcttgctttgactacgtcatgcacttcttgactgtg
ttctggaaggttctgtttgctttcgtgccgcccactgactactggaacggctgggcgtgt
ttcatcgtgtccatcatcatgattggtgtcctcactgcattcattggagacattgcatcc
cattttggatgcactattggcctgaaagactctgtaactgcggttgtgtttgtggcgctg
ggaacctctgtaccagacacattcgctagtaaagtggcagccacccaggatcagtacgct
gacgcctccatcggcaatgtgacgggcagcaatgctgtgaacgtctttctgggcatcgga
gtggcctggtccatcgctgccgtataccaccaggcaaagggcgagtacttccgcgtgcag
cccggcacgctggcgttctccgtcacccttttcaccatctttgccttcatctgtgtcgcc
gtcctcatgtaccgccgcaggcccgagatcgggggggaacttggtggcccgcggactccc
aaaatcctgaccacaacgttgtttttcagtctctggttgatgtacatcatcttctcctcc
atggaggcctattgcatcatcaagggtttctaa
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