Squalius cephalus (European chub): 307150081
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Entry
307150081 CDS
T11930
Symbol
pax7a
Name
(RefSeq) paired box protein Pax-7a isoform 1
KO
K09381
paired box protein 3/7
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307150081 (pax7a)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
307150081 (pax7a)
SSDB
Ortholog
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GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_32
HTH_SB
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
307150081
NCBI-ProteinID:
XP_079712985
LinkDB
All DBs
Position
22:30267788..30328433
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AA seq
507 aa
AA seq
DB search
MATLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEE
YKRENPGMFSWEIRDKLLKDGVCDRGTVPSGEASSVSSISRVLRARFGKKDDDDDCDKKD
EDGEKKTKHSIDGILGDKGNRTDEGSDIESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
PTLSTYQLPESTYPGTTLSQDGSSTLHRPQPLPPSSMHQGGLSADTSSAYGLSSNRHSFS
SYSDTFMSPSASSNHMNPVSNGLSPQVMSILSNPSAVPSQSQHDFSISPLHGGLEASNSI
SASCSQRSDTIKSVDSLASSQSYCPPTYSATSYSVDPVTAGYQYSQYGQTAVDYLAKNVS
LSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaccaggaacagttcctcgaatgatgcggccagctccaggccagaactac
cccagaaccggattcccattagaagtctcaacgcctctgggtcaaggtcgagtgaaccag
ctcggtggagttttcatcaacggaaggccactgccgaatcatatccgacacaaaatagtg
gaaatggcgcatcacggcatccgaccctgcgtgatttccagacaactgcgtgtctcacac
ggctgcgtgtccaaaatcctctgtcggtaccaggagaccggctccattcgtccgggagca
ataggtggaagcaaacccaggcaagttgcaacacccgacgttgaaaagagaatcgaggaa
tacaaacgcgagaatccagggatgttcagctgggaaatccgggataagttgctgaaggac
ggggtgtgtgacagaggcacggttccttcaggtgaggcctcttccgttagctccattagt
cgggttttgagagctcgttttggcaagaaagatgatgatgacgactgtgataaaaaagat
gaagacggagaaaagaaaaccaaacacagcatcgatgggattctcggggacaaaggtaat
cgtacggacgagggttcagatatagagtcggagccagacctgcctctgaagcggaaacaa
agacgcagccgtaccaccttcacggcggagcagctggaggagctcgagaaggccttcgag
aggacacactaccccgacatctacaccagagaggagctggcacagaggaccaaactgacc
gaggctcgtgtacaggtctggtttagcaaccgaagagcaaggtggcgcaaacaagcagga
gcaaatcagctggcagcttttaaccatttgttgcccggagggtttccgcccaccggcatg
ccaaccttatcgacctatcagcttccagagtcaacgtatccaggcaccactctctcgcaa
gatggcagcagtactttacaccggccacagcctctgcctccatcctccatgcatcagggt
gggctttcggcggacaccagctctgcctacgggctctcctccaaccggcactccttctcc
agctattcagacacgttcatgagcccttcagcttcaagcaaccacatgaatcccgtgagc
aacggcctttcgccacaggtgatgagtattttgagtaaccccagtgccgtcccgtcccag
tctcagcacgatttctccatctctcctctccacggtggtctggaggcgtctaactcgatc
tcagcgagctgtagccagcgttcagacaccatcaagagtgtggacagtctggcctcgtcc
cagtcctactgtccccccacatacagcgccaccagctacagcgtggaccccgtcactgct
ggataccagtacagccagtacggccagaccgctgtggactatctggccaagaatgtgagt
ctgtcgactcagagaaggatgaagctgggtgatcattcggcagtgctgggactcctccag
gtggagacaggacaggcttactga
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