Squalius cephalus (European chub): 307150474
Help
Entry
307150474 CDS
T11930
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
scep Squalius cephalus (European chub)
Pathway
scep03013
Nucleocytoplasmic transport
scep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
307150474 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
307150474 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307150474 (thoc7)
03041 Spliceosome [BR:
scep03041
]
307150474 (thoc7)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
307150474 (thoc7)
Spliceosome [BR:
scep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
307150474 (thoc7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
OVT1
COG6_N
DASH_Dad2
Tsi6
Peptidase_S10
Sec8_N
Motif
Other DBs
NCBI-GeneID:
307150474
NCBI-ProteinID:
XP_079713874
LinkDB
All DBs
Position
22:19160278..19162371
Genome browser
AA seq
202 aa
AA seq
DB search
MGSITDDEVIRKRLLIDGDGAGDDRRINVLMKSFSKWCHSSFSPEEGFSQYQRMLTSLAQ
CEFSMGKTLLVYNMNLKEMENYEAIYADIETSITSAHEKIAECKKEIQRAKRIRKNRQEY
DALARVIKQHPDRHETLKQLEALDKELQQLSHIKENVEDKLELRKKQFHVLLTTIQELQQ
TLENDEKMDSDDTQESLMDNGD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcatcactgatgatgaggtcattcggaagcgtcttctgatcgatggagatgga
gctggagacgacaggcgcattaatgtgctcatgaagagcttctccaaatggtgccactcc
agtttctcaccagaggaagggttctcccagtatcaaaggatgttgacatctttggctcaa
tgtgaattctccatggggaagaccctgctcgtgtacaacatgaacctgaaagaaatggag
aattatgaagcaatctatgcagatattgagacaagtataacatcagcccatgaaaaaatt
gcagagtgcaaaaaggaaatccagagagcgaaacggatacggaaaaaccgccaagagtat
gatgctttggccagagtgatcaagcagcatccagacagacatgagaccttaaagcagctt
gaggctttagacaaagagcttcagcagctttcacacatcaaagagaatgtggaggacaag
ttggaacttcgtaagaaacagttccacgtccttctcaccaccattcaggaacttcaacag
actttggagaatgatgagaagatggatagcgacgacactcaggagagtctgatggacaat
ggagactag
DBGET
integrated database retrieval system
