Squalius cephalus (European chub): 307150732
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Entry
307150732 CDS
T11930
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
scep Squalius cephalus (European chub)
Pathway
scep00510
N-Glycan biosynthesis
scep00513
Various types of N-glycan biosynthesis
scep01100
Metabolic pathways
scep04141
Protein processing in endoplasmic reticulum
Module
scep_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
307150732 (rpn1)
00513 Various types of N-glycan biosynthesis
307150732 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
307150732 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
BAR_4
Motif
Other DBs
NCBI-GeneID:
307150732
NCBI-ProteinID:
XP_079714313
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All DBs
Position
22:complement(5486611..5497678)
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AA seq
598 aa
AA seq
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MWSAGAVSLVLISCLFCASVGADGLVNEDVKRTLDLSTHLGKITAEIQLANHGASRVHSF
TLALEPELAPHLAFIGASVKGEEEEDESLELKEKTIPGQSGKFFEAQLPSSLAPGAKLRV
KVETVFSHVLKPFPTQITQAERQLVVFQGNHYLFSPYPTRSQTTRVRLASKTVETYTKLG
NPTKSDEAIEYGPFKDVPPFSQDAMKIHYENNTPFLTISSITRTIEVSHWGNIAVEETVD
LRHTGAYLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQVLD
DSVEVEIRPRFPLFGGWKTHYMIGYNLPSYEYLYNLGDQYALKMRLVDHVYDDQVIDQLT
VKLILPEGARNIHMDTPYPITRSQDELHYTYLDTFGRPVLVATKNNLVEQHIQDVVVHYN
FNKILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVASITEQVLTLVNKR
LGLYRHMDEVVNRYKQSRDTGALNSGRKTLEAEHRTLTNDITALQARLKAEGSDLAEKVG
EIQKLDGQLKDLVSRSCQEAERLVAGKVKKDAYIDSDKTLTGKRQELVSRIDSLLDAL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgccggagcggtgagtttagtgctgatctcgtgcctcttctgcgcgtcggtc
ggcgcggacgggctggtgaacgaggacgtgaagcgcacgctggatctgagcactcacctc
gggaagatcacagccgagatccagctcgccaatcacggggcgtcgcgagtgcacagtttc
acgctcgccctggagcccgagctcgcgccgcatctggccttcatcggtgcatctgtaaag
ggggaggaagaggaggatgaaagcttagagctgaaagagaaaactatccctggacaaagt
ggtaaattcttcgaggcacagttaccgtcttctctcgctccgggtgctaaactgcgggtg
aaggtcgagactgtgttcagtcacgtgctgaagcctttccccacccagatcacccaggcc
gagcgacagctggtggtcttccaggggaaccactacctgttctccccataccccacccgc
tcccagaccacccgtgtgcgcctggcctccaaaaccgtggagacctacaccaaactgggc
aaccccaccaagagcgacgaggccattgagtatggaccattcaaagatgtacctcccttc
agccaggatgccatgaagatccactatgagaacaacacacccttcctcaccatcagcagc
atcactcgaaccatcgaggtctctcactggggcaacatcgccgtggaggaaaccgtcgat
ctgagacacactggtgcctacctgaaggggcccttttcccgctatgactaccagagacag
tctgacagcggcatttcctcagtcaaatctttcaagaccatcctcccagcctctgctcag
gacgtgtactaccgcgatgagatcgggaacatctccacctctcacctccaagttctagat
gattccgtagaggttgaaatccgtccccgtttcccgctgttcggcggctggaaaacgcat
tacatgattggttataatcttcccagctatgaatatctctacaatctgggagaccagtat
gccctgaagatgcgtctggtcgatcatgtctatgatgaccaggttattgaccagctaacg
gtgaaactgatccttcctgaaggagccagaaatatccacatggacaccccgtaccccatc
acccgcagtcaggacgagctgcattacacttacctggacacctttggcaggcctgtgctg
gtggccaccaagaacaatctggtggagcagcacattcaggacgttgtggttcactacaac
ttcaataagatcctgatgctgcaggagccgctgttagtggtgggagcgttctacatcctc
tttttcaccgtcatcatctacgtgcgcctcgacttctccatcaccaaggatccagcagcg
gaggtgcgtatgaaggtggcctccatcaccgagcaggtcttgactctggtcaacaagcgt
ctcggcctgtaccgccacatggatgaagtggtgaaccgctacaagcaatcccgggacacc
ggagccctaaacagcggccgcaagactctagaggctgaacaccgcaccctcaccaatgac
atcactgctttacaagcccgtctcaaggcagagggctccgatctggctgaaaaagtcggc
gagatacagaagctggacggccagctgaaggatctggtgtcccgatcctgtcaggaagcc
gagcggctggtggccggaaaggtgaagaaggacgcctacatcgactcggataaaaccctg
acaggcaagaggcaagagctggtcagccgcatcgacagccttctggacgccttgtaa
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