Squalius cephalus (European chub): 307151098
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Entry
307151098 CDS
T11930
Symbol
rfx7b
Name
(RefSeq) DNA-binding protein RFX7 isoform 1
KO
K09175
DNA-binding protein RFX7
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307151098 (rfx7b)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Other basic domains
RF-X
307151098 (rfx7b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
307151098
NCBI-ProteinID:
XP_079715056
LinkDB
All DBs
Position
23:complement(27956145..27976935)
Genome browser
AA seq
1548 aa
AA seq
DB search
MADDQQQQPGVPGVPGPSLQSLEATALQYNKIKNSICKSVQSKVESILQDVEKFTDIEKL
YLYLKLPSGPSGGNDKRTENQRGSASPALCDQNSMSSSRTQQTYAFNWIRNHLEEHPETS
LPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKA
FVHMPSLPNLDLHKSGDGCELLESTGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSVEE
LARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTSAFVPTGEANSFLPQVKTLPSPSVDAK
QQLQRKIQKKQQEQKLTSPLPTDAQVRRAEAGTPVPGSSLTSGSPALLSPQPTIGIVVAA
VQSPITVQRSRQLMTSPSPVGAAEGKVVPVNFQVVTQSLKQSPKTPQNISASPVGDRLAR
HRYAQILPKPSATSAIALRSPQTLLITNSPIKTVMPTPHVSSVNVVKMTAISLAPNSSSN
SSTPTPLRPASAGISSTASQEEFNQTQQAHNGASAISLQSSGFGKPGRPSITPTPLASTI
TNEVKVTFEAVNDSNSAISVDKQSTASGASTGQKNERATKYRASSEPSLLIKASPVPERV
IRAKSDSTTPSSTIMEALAPSSNNNSNDQPESTLYLTVTSQNVDAELSSICAVATASTSS
KDAGLCLKSPRKRSASVLETHTIPVKRVFVSQQPLDVSSNARPGLVISAKKIQRPGTPAR
PESAPCKVTLKHSSSFPTQILALSDTPIGISRTVNPQIENEVADISLTETASGNSTALLQ
QIPSHHQISSVVSQEVSAVSELKSSLQDFSQQMQAEHKQNAANPLPLMATETSSQLSLQQ
DIVDFAGGQASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLSCVDISLQGQTT
VGQGTIMSPHQTSTQFYHSSHSSATPVHTPTPTPTPTPTPTPTPTSEMLPGGNSMTRESP
CSRMATVTPVDSILGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGYHDGSV
VSSSPVKPMQRPMATHPDKAKLEWITNRYNSTAGSPVISTNSTIAILPSYQDLVEDHFRK
PHAFAIPGQSLQSQSRHQDGNFGRLTAVSPVQQGQQTTLSSRQESFAVPAPLDNKGAGST
SASATFRCRSVSPAVRQRNLSGTTAQTVTTPRSVVSPFNCPLTSEVLNILANNQSVVSAS
TLAQRSQSVPLNIMMQSELLPVSHQAQQSNSAKITTVLLSKMDTDGDDAVRGLGVNNLPS
NYTARMNLTQILETTQGFPGGPNPQNQQLPLDSSPSPFDFQKTGYLISTGEEQVVFSSGD
SQAQSGSGLQQPEEQLELQEPQLELQDQHLQLQNQQLQLPDQQLQLQDQQLQLQDQQMQL
QDQQLQLQDQQLQLQDQQLQLSDQQQLQDDPDLTRQHLLPQTSQQVVDHEQQEQLDFNTT
VKDLLGEDSLNPSSQLVGQVASELSAVASDFSSDIRLTSDLSSSINDLNTLDPNLLFDPS
QQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacagcccggtgttcccggtgttcccggaccgtccctgcag
agcctcgaggccacggcactgcagtacaacaagatcaagaactccatttgcaaatctgta
caatcaaaagtggagagtatattgcaagatgttgagaagtttacagatatcgaaaagctc
tacctctaccttaagttgccttctggtcccagtggtggcaatgacaaaagaactgaaaat
cagaggggctctgcaagtcctgcactatgtgaccagaattcaatgtcgtccagtcggact
caacaaacatacgcgttcaactggatccgaaatcacttagaagagcatccggaaacctca
ctgccaaaacaagaggtgtacgacgaatacaagagttattgcgacaatctgggttaccat
cctttaagcgcagctgatttcgggaagatcatgaaaaatgtttttccgaacatgaaggca
cgtcgtttgggcatgagggggaaatcaaagtactgctacagtggtctgaggaaaaaagca
tttgtgcacatgccgtcactcccaaacctggacttacacaaatcaggagatgggtgtgag
ttgttggagtcgaccggacagtctcccagtgccgaggacgagatgcgttctgctgcctgt
ggtctggtctgcgaatgggctcagaaggtgttgagtcgccagtttgacagtgtggaagaa
ctggcacgctttcttcttaacagtcactatataggcactaagtccatggcagctcttact
gttatgactggaaccccaacaggtatgaaaacccctacgtctgcgtttgtgccaaccggt
gaagccaactcattccttccccaagtgaagaccctcccttcgccttctgtagacgccaaa
cagcagcttcagcgtaagatccagaagaagcagcaggagcagaagctcacctctcctttg
cccaccgatgcccaggtgagaagggccgaggcgggcacacctgtccctgggtccagcctg
acctctggaagtcctgcattactgtcccctcaaccaaccataggcattgtggttgctgct
gttcagagtcctatcacagttcagagaagcaggcaattaatgacctctccaagtcctgtt
ggggcagcagagggaaaagttgtaccggttaacttccaggtcgtgacacaatcccttaag
cagtctccaaaaacaccccagaatatctctgccagcccagttggtgaccggttggccaga
catcgatatgcccagatcttacctaaaccttccgccacaagcgccattgcacttcgctca
ccccaaacgctcctcatcaccaacagccccatcaagacagtgatgcccacgcctcatgtt
agctctgtaaatgtggtcaagatgactgcaatatcgctagcgcccaacagtagcagtaat
agtagtactcctaccccgttgcgacctgcgtcagcaggcatcagtagcacagcttcccag
gaagaatttaaccaaacccagcaagctcataacggggcgtctgccatctctcttcagtca
tctggatttgggaagcctggacgtccttctataaccccaaccccgttagcgtccaccatt
accaatgaggtgaaagtgacattcgaagctgtgaatgacagtaactcagctatttctgtt
gataaacaaagcactgcgtcaggagcaagtacaggacaaaagaacgaaagagccactaaa
taccgggcttccagtgaaccctctctgcttattaaggcgtcccctgtgcctgagagagtt
ataagggccaagagtgactctacaaccccttcaagtacaatcatggaggctcttgcccca
agcagcaataacaacagcaatgatcaaccagaaagtactttgtatttaactgttaccagc
cagaatgtagacgccgaattgtcatccatttgtgcggtggcaactgcaagcacttcttct
aaagatgctggtctctgtctaaaaagccctcgaaaacgctctgcatctgttttggaaacc
catacaatcccagttaaaagagtattcgtttcccagcaacctttggatgttagcagcaat
gccaggcctggtcttgtaatatcagctaagaagatccagagacctggcaccccagcaagg
ccagagagtgctccatgcaaagttacgctaaaacacagtagctcttttccaactcaaatc
ttggctctttccgacactcccattggaatctctcggactgttaatcctcaaatcgagaat
gaagttgctgatatcagcctgactgaaacagcttctggtaatagcacagctttattgcaa
caaatcccaagtcaccaccaaatcagcagtgttgtttctcaggaggtatccgctgtaagt
gagctcaagagctcgcttcaagacttctcgcaacagatgcaagcagaacacaagcagaat
gcagctaatccgttaccgttgatggcaactgagacctccagtcagctctctcttcagcag
gacattgttgattttgcaggaggccaagctagcattgactatttccccttcaatgatgat
gatatgacccaggatagtatcgtagaagagctcgtacagatggaggagcaaatgaagcta
aatagcagcttgcaatcctacctaagttgtgtggatatatccctacaaggtcaaaccaca
gttggacaaggaacaatcatgtcgccccatcagacaagtacccagttctatcattcttcc
catagtagtgcaacgccagtgcacacgccaactccgacgcctacgccaacaccaacgcct
actccaactcctacctccgagatgctaccaggggggaatagcatgaccagagaaagccct
tgttcccgaatggcaactgttaccccagttgatagcatcttaggtgggcgccatacaccc
attagcactccactgtcaaactgcagtagcagtgttcctccaagtcccattgaatgccgc
aatccctttgctttcactcctatcaactccagtataactggttatcatgatggtagtgtt
gtgtccagcagtccagtgaagcccatgcaaaggcctatggccacccacccagataaagcc
aagctggagtggataaccaacaggtacaacagcaccgcaggctctcctgttatctcaacc
aactccaccattgctatcctccccagttaccaggatctggtcgaggaccatttccgtaaa
ccacacgcctttgccatcccaggccaatctctccagtctcagtcaaggcatcaggatgga
aacttcggaaggttaacagccgtttctccagtgcaacaaggacagcaaaccacccttagt
agcaggcaagaaagtttcgccgtcccagctccgttggacaataaaggggccggaagcaca
tccgcatctgcaaccttccggtgtcgtagcgttagcccggcagttcgccagcgtaacctc
agtggcaccactgcacaaacagtcaccactccaaggtctgttgtttctccctttaattgc
cccctgacatctgaggtccttaacattctggccaacaaccagtcggtggtcagtgccagc
accttggcccaaaggagccaatcagtgccgctaaacatcatgatgcagtctgagctgcta
cctgtcagtcaccaggcgcagcaaagcaatagcgctaagatcacaaccgtgcttctcagc
aagatggacacggacggagacgatgcagtgcgaggacttggtgtaaataacctgccctcc
aattacaccgcacggatgaacttaacccaaatcttggagacgacacagggcttccccgga
ggccccaaccctcagaaccagcagctgcctctggactcaagcccttcgccatttgacttc
cagaagacgggttacctcataagcacgggagaggaacaagtcgtcttctccagtggcgac
agtcaagcacaatcaggctctggactgcaacaaccggaagagcagcttgagctccaagaa
ccgcaattggagctgcaagatcaacacctacaactccagaatcaacagctgcaacttcca
gatcagcaattacaactccaagaccaacagttgcaactccaggaccaacagatgcaactt
caagaccaacaattgcaactccaggaccaacagttgcaactccaggaccaacagttgcag
ttgtcagaccaacaacagttacaggatgatccggatctcacccggcagcacttgttgccc
caaacctctcagcaggtcgtggatcacgagcaacaagagcaactggacttcaacactacc
gttaaggatctcttaggggaggacagcctcaaccccagttcacaactcgtcggacaagtg
gcatctgaacttagtgcagtcgcttctgacttttccagcgatatccggttgacttctgac
ctttctagtagcattaatgacctgaacactttggaccccaacttgctgtttgaccccagt
caacagcaggaccaatatgaagatgccacactggaagaactgaagaacgatcctctgttt
cagcagatttgcagcgatactgtgaactctgctggttttgattggctggagaataaagac
cagccaaccgtggaaatgttgggataa
DBGET
integrated database retrieval system
