Squalius cephalus (European chub): 307151232
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Entry
307151232 CDS
T11930
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1 isoform 1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
scep Squalius cephalus (European chub)
Pathway
scep04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
307151232 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307151232 (ap4e1)
Membrane trafficking [BR:
scep04131
]
Endosome - Golgi transport
Others
AP-4 complex
307151232 (ap4e1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
HEAT_2
Cnd1
HEAT_EZ
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
307151232
NCBI-ProteinID:
XP_079715264
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All DBs
Position
23:24839567..24854278
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AA seq
1119 aa
AA seq
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MSDVVEKTLSALPGLFDTQTGASKITSGLKQLIRSITELTSKHEEEKLMKQELSAMKEQV
SSPNTSMKQMREVMVRAMYCEMLGYDASFTYIHAIKLAQQGSVLEKRVGYLAVSLFLSEG
HELLLLLVNTVLKDLQSTNLIEACMALTVVAQVFPKDMIPAVLPLVEDKLSHPKEIIRRK
AVLALYKFYLIAPNQVQHIHAKFRKALCDKDPGVMTSSLHIYLQLIRESPEGYKDLTGSF
VAIMKQVVGGKLPMDFYYHNVPAPWLQIQLLRILSLLGREDQSTSELMYEVLDESLRRAE
MNHNITYAILYECVKAIYTIHPKAELLEKAARCIGNFVLSPKINLKYLGLKALTYVVQHD
AKLALQHQMTIIECLDHSDFTIKRETLELLFRITNAQNVTVIVEKMLDFLRGCKDEHTII
HLVGKVAELAEKFAPDNSWFIHTMNDVFSIGGDSLQQDVPNNFLRLLAEGSECKEEDDEL
RLFAVDSYLTVLKGDASHLPQHFLQVMSWVLGEYSHLQECVDQREVIRLLTKLLDERSVS
SETRVWILSALTKIPEGQTDLILELAESLSSSQDTVLRQQAQELRHLSRDSQLQECVLPR
GAPWDSMEVDSSLSFLDGFVSEALAAGAAPYKPPHQRQEELSEERALNLEPYSFSLPVSL
SSCCITDRQSPPLLSVSSGLSGNSTELSQKEGSSSLILEGVKRVWGKDGYLPQKETAATA
PPVDEPGIAVHPSGQQEAAERIEPQPEPSPRNQDKQQLASSLFVGLGTQSSISLLGKSEA
PPPRFRKKPRPHESSSSSSGTSERSSDSSSRSSHSKTDSFLYGSLLEEEPVTSTSTTTNG
LSQNKHAEGERRANTSQILGSDMVIVRPNTIQDRHPPSVSSDLTALLPSEIKDLPHSDVI
SLTSDPSLSLASCRMFREEALLLVIFICNCTETVIKDVAVQLTCEELETASLRGNVVDCL
EGKSTSVCHYALLMDEPHTNVSFTGTVSYQTQPGHTNTLPFSGTLSTTDFIRPLVVTTEE
YGKLWLSLSHDVKQNLKLLTDAGGDPLKTTLNALKDALQLHVVDIIGSEGIIACRLLSGA
PCLLHCRVNGSALAVWLRSPHPSLPDCIMYHCQRALAEL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttgtggagaaaactctctctgctctgccgggtttatttgatactcaaact
ggagcctcaaaaatcaccagtggattaaaacaactaatcaggagcatcacagaactgaca
tctaaacatgaggaggagaagctcatgaagcaggagctgtctgccatgaaagagcaggtt
tcatctcccaacaccagcatgaagcagatgagagaggtcatggtgcgagccatgtactgt
gagatgctgggctacgacgcctccttcacatacattcatgccatcaaactggcccagcag
ggcagcgtcctggagaagagagtggggtacctcgccgtgtctctcttcctcagcgagggc
catgagttgctgttgctgctggtaaacacagtattaaaggatctgcagagcacgaacctc
attgaagcgtgcatggcgttgactgttgtagctcaggttttccctaaagacatgatccct
gccgtccttcctctggtggaagacaagctgtcacatcccaaggagatcattcggaggaaa
gccgtcctggcgttgtacaagttttatcttatcgctccgaatcaagtccagcacattcac
gccaagtttcgtaaggccctgtgcgacaaagatccgggcgtcatgacatcatcactacac
atttacctacagctgatcagggagagtccagagggctataaagatctgacaggcagtttc
gtcgccatcatgaagcaggtggtgggtgggaaactcccgatggatttttactaccacaac
gttcctgcgccgtggctgcagatccagctgctcaggatcctctcgctgctcgggagagaa
gaccaaagcaccagtgagctgatgtatgaagttctggatgagtctctgcgcagagcggaa
atgaaccacaacatcacttacgcaatcctgtatgagtgtgtgaaggccatctacaccata
caccccaaagccgagctgctggaaaaagcagcgagatgcatcgggaattttgttctgtct
ccaaagatcaacctcaaatatcttggtttgaaagccttgacgtacgtcgtccagcatgat
gccaaactggccctgcagcatcagatgaccattatcgagtgtttggaccactctgatttc
accattaagagagagactcttgaattgctgttcaggatcacaaacgctcagaacgtgacc
gtgatcgtcgagaagatgctggacttcctgcgcggatgcaaggacgagcacaccatcatc
catctggttggaaaagttgcagagctcgctgaaaagtttgctccagataactcgtggttc
attcacactatgaatgatgttttttccatcggtggagattcgctgcaacaggacgtccca
aacaacttcctgcgactgctggcggagggctcagagtgtaaagaggaagatgatgagtta
cggctgtttgctgtcgactcgtatctgacggtgctgaagggggacgcttctcatctgccc
caacacttccttcaggtcatgagctgggttcttggagaatactctcacctccaagagtgt
gtggaccagcgcgaggtcatccgactcctgacgaagctgctggatgagagaagcgtgagc
tcagagacgcgggtctggattctgtcggccctgaccaagatccccgagggccagacagac
ctgatcctggagctggccgagagcctttcgtcctcgcaggacacggtcctccgtcagcag
gcgcaggagctgcgtcacctcagccgggactcacagctccaggagtgtgtgcttccccgt
ggagcgccctgggacagcatggaggtcgactcttctctgtcatttctggatgggttcgtg
tcggaggctttggccgcaggagccgcaccttataaacctcctcatcagagacaagaagag
ctttctgaggagagagcactgaatctggagccgtacagtttttctctgcctgtaagttta
tcatcatgttgcatcactgatagacagtctccaccactactgtccgtcagttcaggactt
tcgggaaacagcactgaactctctcagaaggaagggtccagctctctgattcttgagggt
gtgaagagagtttgggggaaagatgggtatcttccacaaaaagaaaccgcagcaacagca
cctccagtggacgaacccggcattgcagttcatccctccggccaacaggaggcagcagag
cgaatagagccgcaaccggagccatcaccgcgaaaccaggacaaacagcagctggcttcc
tctttgtttgttggtttgggaacccaaagctccatatctctgctgggaaaatccgaagcc
ccaccccctcgctttcggaaaaagccccgcccacatgagtcatcatcatcatcatcaggc
accagcgagagatcctcagactcctcctcccgctcctcgcacagcaagactgacagcttc
ttgtatggcagtttgctggaggaggagcctgtcacatccacatccacaacaaccaatggc
ctgagtcagaacaaacacgcggaaggagagcggcgcgcaaacacgtctcagatactgggc
agcgatatggttatagtgcggcccaacacgatacaggacagacatcctccgtccgtgtct
tcagatctgaccgcgctgttaccctctgaaatcaaagacctacctcactctgatgtcatc
agcctgacctctgaccccagcctgtctctggcctcctgccgtatgttcagagaggaagct
ttgctgctcgtcatcttcatatgtaactgcacggagactgtgataaaagatgttgcagtg
cagctgacctgtgaggagctggagacggctagtttgagagggaatgtcgtagactgtctg
gagggcaagagcacgtctgtgtgtcattacgctctgctgatggacgagcctcacacaaac
gtgtcctttaccgggaccgtctcttatcaaacacagccaggacacacaaacacactccct
ttctctgggacactgtccacaacggactttatcaggcctttggttgtaaccacagaggaa
tatgggaaactctggctgtctctgtcacatgacgtcaaacagaatctgaaactgctgaca
gatgctggtggagacccgctcaaaaccaccctgaacgctctcaaagacgccctacagcta
catgtagtggacatcatcggctctgagggaatcatagcgtgccgtctgctcagtggcgcc
ccctgtctcctgcactgcagagtgaacggctcggctctggccgtgtggctgcgctctcct
catccttctctcccagactgcatcatgtaccactgccagagagcgctcgcagaactctaa
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