Squalius cephalus (European chub): 307151269
Help
Entry
307151269 CDS
T11930
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform 1
KO
K06485
integrin alpha 6
Organism
scep Squalius cephalus (European chub)
Pathway
scep04382
Cornified envelope formation
scep04510
Focal adhesion
scep04512
ECM-receptor interaction
scep04514
Cell adhesion molecule (CAM) interaction
scep04518
Integrin signaling
scep04810
Regulation of actin cytoskeleton
scep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
307151269 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
307151269 (itga6b)
04518 Integrin signaling
307151269 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307151269 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
307151269 (itga6b)
04810 Regulation of actin cytoskeleton
307151269 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
307151269 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scep04147
]
307151269 (itga6b)
04515 Cell adhesion molecules [BR:
scep04515
]
307151269 (itga6b)
04090 CD molecules [BR:
scep04090
]
307151269 (itga6b)
Exosome [BR:
scep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
307151269 (itga6b)
Exosomal proteins of breast milk
307151269 (itga6b)
Cell adhesion molecules [BR:
scep04515
]
Integrins
Integrin alpha subunits
307151269 (itga6b)
CD molecules [BR:
scep04090
]
Proteins
307151269 (itga6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
307151269
NCBI-ProteinID:
XP_079715348
LinkDB
All DBs
Position
2:complement(33618397..33639942)
Genome browser
AA seq
1084 aa
AA seq
DB search
MGSYRTLTLLLLSFLGWTLISAFNLDTDNVIRKTGDPNSLFGFSLAMHRQLRPSDKRMLL
VGAPRAKALSKQTSTITGGMYSCDITSPSQSCQRVMFDNEENLQTENKQNQWMGVTVQSQ
GPGGKILVCAHRYQRRLFVNTIQELRDVTGRCYVLSQDLTVDAGSDEDGGDWMFCNGRNR
GHERFGSCQQGLSATFTKDYHYLVFGAPGAYNWKGVVRMEQKNSSLWENFDDGPYEVGDE
NRLDPDLVPVPSNSYLGFSLDSGKMLTKRGQLTIVAGAPRANHSGAVVLLKKEEGKSSML
TAEYILEGSGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDIGGAIYVYLNKEGAW
DKITPERIVGAANSMFGLAVESMGDVNLDGYHDVAVGAPYENNGAGNVHIYHGSSRGLKK
SQVLEGKDHNVKLFGYSLAGNMDMDRNSYPDLAIGSLSDSVLVYRARSVINIEKTVTTTP
TELDLTQKNCGDNICLSVTACFSFSANPKTYNPNLKVAYNIRVESERKKLNLPSRVIFTQ
SSTNEYESKGIVELKGQGTQSCVMRDLRLQETLKDKLRGIPIEVSVELLKPTTRRKRQTA
LPNLLPILDSSQAASTTTSVQFIKEGCGTDHVCQSDLQLQYKLHTREPNRDIFHPLPEEN
GVPILSLSDQKDIALELKVNNKGEDAYEAQLTASFPKSLSYSAVRTKSSEKPISCLANQN
GSQADCDLGNPFTRNAETTFYIILSTGGISLDTTEIEIDLKLKTTSNQTQFQAVKAKAIV
KIQLLLSLTGVAKPSQVYFTGEVKGESAMKLATDVGSPIDYEFRVTNLGKPLKSFGTASM
IIQWPKHNSQGKWLLYLMKITSTDLDSFSCSNQDEVNKLSLKEPLVSRTKREIGETPAKE
GTVSLFTDKRKYTVLSCEDGAECITFKCPLMGMDSNAVISLRAYLWNATFLEEYAKLNYI
DIIVKASLDFKTSATNIQLKNEPAQVRVTVFPERKVAQYGGMPWWVILVAILLGLLLLGL
LVFLLYKCGFFKRSKYDDSVPSYNAVRIKREKREERDYMPGKKEMDPPEKKQWMTSWNEN
ESYS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttacaggactttaaccttacttcttctcagttttttgggatggacgctgatc
tctgccttcaacctggacacagataatgttatcaggaaaacgggagatcccaacagtttg
ttcggtttctccctggcaatgcaccgacaactcagaccatctgataaaagaatgttgctg
gttggtgccccaagagctaaagcattgtccaagcaaacgtcaacaattacgggagggatg
tacagctgtgacataacttctcccagtcagtcatgccagcgagtaatgtttgacaatgaa
gaaaacttgcaaaccgaaaataagcaaaaccagtggatgggagttactgtacagagccag
ggacctggaggaaagatattggtctgtgcgcatcgctaccagcggcgcttatttgtgaac
acaattcaggagctacgtgacgtgacgggtcgttgctacgtactaagtcaggacctgacg
gttgatgcaggctcagatgaagatggaggggactggatgttctgtaacgggagaaacaga
ggacacgagcggtttggttcatgccagcagggtctgtctgctacattcacaaaagactat
cactatctggtgtttggagcaccgggtgcttacaactggaaaggagtggtgcggatggaa
cagaagaacagctctctgtgggaaaattttgatgacggcccatatgaggttggagacgaa
aaccgacttgatccagacctggtgcctgtcccttccaacagttatttaggtttctctttg
gactctggaaaaatgctgaccaagaggggtcagttgactatagttgctggggctccaaga
gccaatcacagtggggcagttgtgctattaaagaaggaagaaggtaaatcatccatgttg
acggctgagtacatactagagggttccggacttgcctcttcctttggttatgaccttgca
gtgctagacatcaatggagatgggtggcaggacattgtagtcggagcacctcagtacttt
attaaagacggtgatatcggtggggccatctatgtttaccttaataaggaaggggcttgg
gacaagatcacccccgagaggattgtgggagccgccaattccatgttcggtttggctgtg
gaaagcatgggagatgtgaacctggatggttatcatgatgttgctgttggtgccccatat
gagaacaatggagctggaaacgtacatatataccatggttcatctcgaggcctaaaaaaa
tcccaggttcttgaaggaaaagatcacaatgtgaaactctttggatactctcttgctggg
aatatggatatggacagaaattcttacccagatctggctattgggtctctctctgattca
gtgcttgtgtacagggcacggtcagtgatcaacattgaaaagactgtcaccaccacacca
acggagctagaccttactcagaaaaactgtggtgacaatatatgccttagcgtgacagcc
tgtttcagtttttctgccaaccccaaaacctacaatcctaacctgaaggtggcatacaat
atcagggttgaatctgaaaggaagaaacttaatcttccttctagagtcatcttcacccag
agctcaaccaatgagtatgaaagcaaagggatcgtagagctcaagggtcagggcacacaa
agctgtgttatgagagacctcagactgcaggaaaccctgaaagacaaactgagaggcatt
cccattgaagtctctgtggagctcctgaagccaaccactcgcaggaagagacagactgct
ctccctaacctacttcccatcctggactccagtcaagcagccagtactactaccagtgtt
caatttatcaaggaaggatgtggtactgaccatgtatgtcagagtgacctgcaactacag
tataaattacacactagggaaccaaacagggacatctttcatccattacctgaagaaaat
ggagttcccattctgtctcttagcgatcagaaggacattgccctggagctcaaggtgaac
aacaagggtgaagatgcttatgaagcgcagctgactgcctccttccccaaatccctctct
tattctgccgttcgcactaaatctagtgaaaaaccgatcagctgtttagccaatcagaac
gggtctcaagctgactgtgatctcggaaatccgttcactagaaatgcagagacaactttt
tacatcattctgagtacgggaggaatttctttggataccactgaaattgaaattgacctt
aaactcaaaacgacaagtaaccagacgcagtttcaagcagtcaaagccaaagccattgtt
aagatccagctgctgttgtctctcacaggggtagctaagccatctcaggtctactttact
ggagaagttaaaggagagagtgccatgaaactggcaactgatgttggcagtccaattgac
tatgaattcagggttacaaacttgggcaaacccctcaagtcgttcggcacggcatctatg
attatccaatggcctaagcataactcccaaggcaagtggctgctgtacctcatgaagata
acctcaaccgatttagacagcttcagctgctccaatcaagatgaggtcaacaaactcagt
ttgaaggagcctttagtgtcacgaacgaaacgtgaaattggggaaactccggcaaaagag
ggaacagtctctctttttactgacaagaggaaatacacagttttgtcctgtgaggatggg
gcggagtgtataacgttcaaatgtcctctaatgggaatggacagcaatgctgtcattagc
ctgagagcttacctttggaacgctaccttcctggaggaatatgcaaaattgaactacatt
gatattattgtcaaggcatcactcgatttcaagacctcagctacaaatatacagctgaaa
aatgagccagcccaggtacgcgttactgtgtttcccgaacgcaaagtagcacagtatggt
ggtatgccctggtgggtcattctggtggccattttactaggactcctcttgttgggccta
ctggtctttctgctttataagtgtggatttttcaaacgctccaaatatgatgacagcgtc
cccagttataacgctgtgcggataaagagggaaaagagggaagagagggactatatgccg
gggaaaaaggaaatggatcctccggagaagaaacaatggatgacttcttggaatgagaat
gagagctactcatag
DBGET
integrated database retrieval system
