Squalius cephalus (European chub): 307151614
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Entry
307151614 CDS
T11930
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
KO
K12183
ESCRT-I complex subunit TSG101
Organism
scep Squalius cephalus (European chub)
Pathway
scep03250
Viral life cycle - HIV-1
scep03272
Virion - Hepatitis viruses
scep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
307151614 (tsg101a)
03272 Virion - Hepatitis viruses
307151614 (tsg101a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
307151614 (tsg101a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307151614 (tsg101a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scep04147
]
307151614 (tsg101a)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
307151614 (tsg101a)
Exosome [BR:
scep04147
]
Exosomal proteins
Proteins found in most exosomes
307151614 (tsg101a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
Tuftelin_like
DUF3450
STB2_C
SSNA1
SPC25_N
Het-C
Helical_needle
UQ_con
CC_Bre1
ANG-1
FapA
CEP135_N
Exonuc_VII_L
SlyX
T4SS_LegC2C7
ENTR1
Prominin
Xpo1
LEKR1
FlaC_arch
Spc7
TPR_IF140_C
SKAP
EMP24_GP25L
CRWN_second_CC
CCDC90-like
TcaA_2nd
DUF7856
DUF4200
Motif
Other DBs
NCBI-GeneID:
307151614
NCBI-ProteinID:
XP_079715847
LinkDB
All DBs
Position
23:9018335..9030315
Genome browser
AA seq
390 aa
AA seq
DB search
MAVVNEGALKKMLKQYKYRDLTVREITNVISQYKDLKPVMDAYVFNDGSSRDLMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQPPYQAFQAAGPPNQSYMPGMPAVSPYGPNPN
PCGYPGYPYPGGNAYPATGGPAHYPSQTPATTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEDMVSRLDQEVAEVDRNIELLKKKDEELSE
ALEKMENQSENNDIDDVIIPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtcaacgaaggagctcttaaaaagatgctgaagcaatacaagtacagagat
ctcactgtccgagagataacaaacgtcatctctcagtacaaagacctcaaacccgttatg
gatgcgtacgtgtttaatgacggatcatccagagacttgatgagcctcacaggaactgta
ccagttagttatagaggaaacgtgtacaatattcctgtgtgcttgtggctgttggatacg
tatccctacaatcctcctatatgttttgtgaagcccaccagtgcgatgatgatcaagacc
ggcaaacacattgatgccaacggcaagatctacctgccctacctgcacgagtggaagcat
cctcagtcagatctatacgggctcatccaggtcatgattgtggtgtttggcgaggagccg
cctgttttctccagacccacgacacagcctccttaccaggccttccaagcggccggaccc
cccaaccagtcctatatgccaggaatgccagcagtgtctccctacggccccaacccaaac
ccatgtggttacccaggttacccttacccaggaggcaatgcttatcctgccacaggtggt
cctgcacattacccttcccagactcctgccaccactgtgggtccaagtcgtgatggtacg
atcggtgaggacaccatccgagcatcgctaatctcggctgtgagtgataaactgcgctgg
agaatgaaggaggagatggacagagcacaagccgagctggacgccctgaagaggacagag
gaagacctgaagaaaggacaccagaagctggaagacatggtgtcccgcctggaccaggaa
gtggctgaggtggaccgaaacattgagctcctcaagaagaaggacgaggaactgagtgaa
gctctggagaagatggagaaccaatcagaaaacaatgacattgatgacgtgatcataccg
acagccccgctctacaagcagatcctgaacctgtatgcagaggagaacgctatagaggac
accatcttttacctgggagaagccctgcggagaggagtcatcgacctggaggtctttctc
aagcatgtgcgtctgctgtcccgaaaacagttccagctgcgagcgctcatgcagaaagca
cgaaagaccgctggactgagtgacctttactga
DBGET
integrated database retrieval system
