Squalius cephalus (European chub): 307151813
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Entry
307151813 CDS
T11930
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
scep Squalius cephalus (European chub)
Pathway
scep04510
Focal adhesion
scep04512
ECM-receptor interaction
scep04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
307151813 (lamb4)
04518 Integrin signaling
307151813 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307151813 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMB1
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
Cor1
F5_F8_type_C
C03B1_C
Motif
Other DBs
NCBI-GeneID:
307151813
NCBI-ProteinID:
XP_079716116
LinkDB
All DBs
Position
23:complement(12282423..12308437)
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AA seq
1828 aa
AA seq
DB search
MQIRWETSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLYRPQNYC
ILGYLENDRKCFTCDSRSPYNLHRNPNSHRIENIITTFQPERKMRWWQSENGVHEVSIQL
DLEAMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSFPGVSEEPADSL
DDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDSTIQELITLTNLRVNFTRLITLGD
TLLTRRRRNPQDKYYYALYEMVVRGTCFCNGHASQCVPVDGTRGDTFSEPGMVHGRCVCQ
HNTVGYNCELCQDFYHDAPWRPGGKTDSDVCRSCNCHGHSEKCHFDLARYLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPDGSVDRGVCDPVTGQCVCK
QNVEGERCDRCKFGFYGFNRDEPGGCQLCRCNFMGTIRTDNPCDQTTGRCICEHFAYGPQ
CDQCLPGYWGLGNTVYGCLPCDCDIGGALRSECSSVDGQCECRPNMVGHKCSDPAPGYFL
APLDFYIYEAENAVPLSANSPFIQAPTTVYLPEQIPERPAKLPLCPFAPKPSPIPNKEPE
PQTVKPTSTPYNPHVTLPVCEHYFRERGYDFKISNGRVVVYKPEKRKRRRRRQGQRTIPF
EPGSSLQIIQRERVSDQSVTWTGPGFVRVQDGEGLRFTVSNIPAALDYYVVIRYEPESTD
DWTAIVNVVPLGSGDGRCQNDPSDKVFTLSGSGRTATLDLPVCLNDGNNYYVDVAFRKQH
KAGPQTSSYILIDSLGLIPKVDSLPNVCSQSHLSQFQQYRCIELGAQAGEQTPYEVCEKH
IGSMSAFIHNGAVACNCHQVGAFSSSCSKFGGQCQCKPNVIGRCCDSCAPVTYGLGPNGC
SPFDCDPSGSTAELCDQTTGQCPCRDGVTGRRCDKCYPGYYGFPLCRQCQCNRLADICDP
ITGDCLYCREHSTGPNCESCKDGYVGDPVSGQPCEPCLCPDVDGSGRFFAISCNKDLYSG
APNCECLPGHTGQHCDSCAPGYYGDLRLPGGRCEECCCNNNIDSRDGDACDAVTGECLRC
IHNTEGPRCQSCKIGYYGNALAQDCKECSCDRRGTDDTKCPPGSPCFCDQETGECPCRKG
VKGALCNECADGYWNLDGESGCEPCNCDPEHALNYACEKITGQCFCQSEYGGRKCDECGP
NHFGNPDIQCISCDCNMEGTIFPACDTYTGECLCKPGVTGLFCDECAPGHNTNFPACEPC
HACFHLWEKIVSDIRIDAERIETMMPCPEDYRPPSDLQHLQDLLEKLQSLLNMTAQDELE
KLEKLLARIRNETETIDPNIIIIDPTVLLNTDIDNIRLEFNRLLKNLREKAKEVPVTDVK
ANDILNKIKKLYDEFTDSVKKVEAAKKTQEASRKTRENATLELAKCRIGEMDKLERKVKA
LSVANLNEEICGAPGDVECEKAKCGGALCGMCGGPACTGSLPISLNASKLAEVTEKNITA
LRNKLKEDDAKLMNTSKMTNYIKDQAEELMNKINQTKNKYEKEKTDTKNLIEKLNNYLRD
EMVRPEDIEKLANAVLSIQLPKSPDEIKDMIENIKKILANITDFNDDLEHLEKQAKIAEN
LKERAKEILNRTKAIDVREIEKVLNDTEELNDKIVNDLDEADENNYAISGKVNETEPKLK
NIEDNLDSTRAKKLLDEIQALKNKTEMNRAQGKEAKDAANAALASANDVNDDLEELKEQF
EKLKLNSTNQNVNEEANERLKNITMEAETLAKYVEDKMKNIEDLEKRILDAIERKEEKMK
DLEALQKEADYLKNFIVDKVEKYDLCST
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgatgggagacttcagcgttcctgcttctcttgatagcagctccagtccgc
ctccaggatgaatgtgtggggaattcgtgttatcctaacctcggtgacctcatggtgggc
cgagccgcccaactcactgcttcttcaacctgtggcctctacaggccgcaaaactattgt
atcctgggatacctggagaatgatcgcaagtgcttcacctgtgactccaggagcccctac
aatctccaccgcaatcccaacagccaccgcatagagaacatcatcaccaccttccaaccc
gaacgcaagatgaggtggtggcagtctgagaatggtgtgcatgaagtcagcattcagttg
gatctggaagcaatgtttcagtttagtcatttgatattgacattcaagagtttccgacct
gctgccatgttggtcgagaggtcaaaagacttcgggagaacctggaaggttttccgttac
ttcgcagaggactgtgccaactcattccccggcgtctctgaggagccagcagacagtctt
gatgacctcatctgtgacagtcgctactctggggcagagccatccaccgatggagaggtg
gtgttaaaagccttggatccaagttttgacatccatgatccatacgactctactatacaa
gagctgatcaccctgacgaacctccgagtaaactttacccgtttgatcaccctgggcgac
acgttgctcacgcgacggaggaggaacccacaggataagtattattacgccctctatgag
atggtcgttcgcgggacctgcttctgcaatggccacgccagtcagtgcgttcccgtggat
ggcacacgtggagacaccttcagtgagcctggcatggtgcacggtagatgtgtttgccaa
cacaacaccgtaggctacaactgtgagctctgtcaagacttctaccatgacgccccctgg
aggccagggggaaaaacagactcagatgtttgcagaagctgtaactgtcatggccattca
gagaagtgtcactttgacctagcacgctatctggccactggtggggttagtggtggtgtg
tgtgatgactgcaggaataaccgtgtaggatctcagtgtgagctgtgtgggccgtattac
taccaggaccctcaacgttctgtggacgaccccaacgcctgtataccttgtgaatgtgat
cctgatggctcagtggaccgtggtgtgtgtgatccagtgactggccagtgtgtgtgtaaa
cagaatgttgaaggagaacgctgtgaccgctgcaagtttgggttctacgggttcaaccgg
gatgaacctggcggctgtcagttgtgcaggtgtaatttcatgggaacgatacgcacggac
aacccttgtgatcagaccacaggaaggtgtatttgtgagcactttgcttacggcccacag
tgtgaccagtgtctgccaggttactggggtctgggaaacacagtctatggctgcttacct
tgtgactgtgacattggaggggccctaagatctgaatgttcctctgtggatggccagtgt
gaatgcaggcctaacatggtgggccacaaatgtagtgatccagctcctggatatttcctg
gctcctcttgatttctatatttatgaggctgagaatgcagtgcctctgtcggcaaattct
ccatttattcaggccccaacaacagtctacctcccagaacagatacctgaacgaccagcc
aagctccctctatgtccctttgctccgaaaccctccccaatacctaataaagaacctgaa
ccccaaacggtgaagccaacttcgaccccatacaacccccatgtcaccttgcccgtctgt
gaacactacttcagagagaggggttatgacttcaagattagtaatggaagggttgtggtg
tacaaacctgagaaacggaaaagacgaagacgaagacaaggccagaggacaatccccttt
gaaccaggctcatctctacagatcatccagcgagaacgtgtctcagatcagtctgtcact
tggactggaccgggttttgtccgagttcaggatggggaaggactcagatttactgtcagc
aatataccagcagctcttgattactatgtagttatccgctatgaaccagagtccaccgat
gattggacagctattgtgaacgttgtcccacttggatcaggggatggacgttgtcagaat
gacccatctgacaaagtgtttactctttcaggctctggaaggacagccactctggatcta
ccagtgtgcctcaatgatggtaataattactatgtggacgtcgcttttagaaagcagcac
aaagcaggccctcagaccagctcatacatcctgattgactctttgggcctcattcccaaa
gtggactccctcccaaacgtctgttcgcagtcacatctatctcagtttcagcaataccgc
tgtattgagttgggagcacaggcaggagagcaaaccccatatgaagtatgtgagaagcat
attggaagcatgtctgcctttattcacaatggtgcagtggcttgcaactgtcatcaagtt
ggagcgtttagctcatcatgcagtaaattcggtggacagtgtcaatgcaaacctaatgtt
attggccgttgctgtgattcctgtgctcctgtgacgtacgggcttggacccaatggctgc
tcaccatttgactgtgatccatctggctctaccgctgaactgtgtgaccagacaactggt
cagtgcccgtgtcgagatggagtaactggccgtcgttgtgataaatgttaccctggttac
tatgggtttcccctgtgcagacaatgccaatgcaacaggttggctgacatctgtgacccc
atcactggagactgtttgtactgcagggaacactccacgggaccaaactgtgaaagctgt
aaagatggttatgttggtgaccctgtctctgggcagccatgtgagccatgcttatgtcca
gatgtggatggaagtggacgtttctttgccatttcctgcaacaaggatctgtactctgga
gccccaaactgtgaatgtctgcctggacatacaggccaacactgtgactcctgcgctcct
ggttattacggtgacctgaggttgccaggtggccgatgcgaggagtgctgttgcaacaat
aacattgattctcgagatggtgatgcatgtgatgctgtgactggcgagtgtttgcgctgc
atacacaacacagaagggccgcgatgtcagagctgcaaaattggatactatggcaatgct
ctcgctcaagactgcaaagagtgttcttgtgaccggagaggcacagatgacacaaagtgt
ccacctggaagcccctgtttctgtgaccaggaaaccggcgagtgcccatgtcgcaaaggt
gtcaaaggagccctttgtaatgagtgtgcggatggatactggaacctggatggggagtct
gggtgcgagccttgcaattgtgacccagaacatgctctcaactacgcctgtgaaaagatc
acaggccagtgtttctgccagtcagagtatggaggcagaaaatgtgatgagtgtgggccg
aatcactttggaaacccagatatacagtgcatatcttgtgactgtaacatggagggcacc
atttttccagcttgcgacacttacaccggtgagtgtttgtgtaagccaggggtgacaggc
cttttctgtgatgaatgtgccccgggtcacaacaccaactttcctgcctgtgaaccctgc
catgcctgcttccacctctgggagaaaatcgtctcagatattagaatagatgctgagagg
atagaaactatgatgccttgccctgaagactatcggcctccatctgatctacaacactta
caggatttgttggagaagttgcagagtcttcttaacatgactgctcaggatgagcttgaa
aaactagagaagctcttggcacgcattaggaatgaaacggagaccattgacccaaacata
atcattattgatccaaccgtacttctcaacactgacatcgacaacatccgccttgagttc
aataggctgttgaagaatctcagagagaaggcaaaagaggttccagtgacagatgtaaaa
gctaatgatattttgaataagatcaaaaagctctatgacgaattcactgacagcgtgaag
aaagtggaagcggctaaaaagacccaagaagcctccaggaagacaagagagaatgccaca
ttggaacttgcaaagtgtcgcataggagaaatggataagctggaaaggaaagtgaaagct
ctgagcgttgccaatctcaacgaggagatctgtggggctccaggtgatgtagaatgtgag
aaagcaaaatgtggtggagctttgtgtgggatgtgcggggggccggcctgtacggggagt
ttacccatcagcctcaatgcctccaaactggcagaggtgaccgagaagaacatcactgct
ctgcgcaataaactcaaagaagatgatgcgaagctcatgaacacctcaaaaatgactaat
tacatcaaagatcaagcagaggagctgatgaataaaattaatcagactaagaacaaatat
gagaaggaaaagactgacaccaagaacctcatagagaagctcaataactacctaagagat
gagatggtgaggccagaagacattgagaaactggccaatgctgtgttgtccattcagcta
cccaagtcccctgatgagatcaaggacatgattgagaacatcaagaagatcttggcaaac
atcacagacttcaacgatgatctagagcacttagaaaaacaagccaaaattgcagaaaac
ctgaaggagagggccaaagaaatcttgaacagaaccaaggcaattgatgtaagggagata
gagaaagtactgaatgatacagaagagctcaatgacaagatagtcaatgatctggatgag
gctgacgaaaacaattatgctatcagtggcaaagttaatgagactgaacctaaactgaaa
aacattgaggacaatttggattcgactcgagccaaaaagttattggatgaaatccaggcc
ttgaagaataagacggagatgaacagagctcaggggaaggaggccaaagatgctgccaat
gcagctctcgccagtgccaatgatgtcaacgatgatcttgaagaactgaaagagcagttt
gaaaaattaaaactgaatagcacaaaccagaatgttaatgaagaggctaatgaacgtcta
aagaacatcacaatggaggcagagacgctggctaaatatgtggaagataaaatgaagaac
attgaagacttggagaaaaggattctggatgcaattgaaagaaaagaggaaaagatgaaa
gatttggaggcactccagaaggaggcagattatttgaagaactttattgttgacaaagtg
gaaaaatatgatctgtgctccacttaa
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integrated database retrieval system