KEGG   Squalius cephalus (European chub): 307151813
Entry
307151813         CDS       T11930                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
scep  Squalius cephalus (European chub)
Pathway
scep04510  Focal adhesion
scep04512  ECM-receptor interaction
scep04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:scep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    307151813 (lamb4)
   04518 Integrin signaling
    307151813 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    307151813 (lamb4)
SSDB
Motif
Pfam: EGF_laminin LAMB1 Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB4 Cor1 F5_F8_type_C C03B1_C
Other DBs
NCBI-GeneID: 307151813
NCBI-ProteinID: XP_079716116
LinkDB
Position
23:complement(12282423..12308437)
AA seq 1828 aa
MQIRWETSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLYRPQNYC
ILGYLENDRKCFTCDSRSPYNLHRNPNSHRIENIITTFQPERKMRWWQSENGVHEVSIQL
DLEAMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSFPGVSEEPADSL
DDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDSTIQELITLTNLRVNFTRLITLGD
TLLTRRRRNPQDKYYYALYEMVVRGTCFCNGHASQCVPVDGTRGDTFSEPGMVHGRCVCQ
HNTVGYNCELCQDFYHDAPWRPGGKTDSDVCRSCNCHGHSEKCHFDLARYLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPDGSVDRGVCDPVTGQCVCK
QNVEGERCDRCKFGFYGFNRDEPGGCQLCRCNFMGTIRTDNPCDQTTGRCICEHFAYGPQ
CDQCLPGYWGLGNTVYGCLPCDCDIGGALRSECSSVDGQCECRPNMVGHKCSDPAPGYFL
APLDFYIYEAENAVPLSANSPFIQAPTTVYLPEQIPERPAKLPLCPFAPKPSPIPNKEPE
PQTVKPTSTPYNPHVTLPVCEHYFRERGYDFKISNGRVVVYKPEKRKRRRRRQGQRTIPF
EPGSSLQIIQRERVSDQSVTWTGPGFVRVQDGEGLRFTVSNIPAALDYYVVIRYEPESTD
DWTAIVNVVPLGSGDGRCQNDPSDKVFTLSGSGRTATLDLPVCLNDGNNYYVDVAFRKQH
KAGPQTSSYILIDSLGLIPKVDSLPNVCSQSHLSQFQQYRCIELGAQAGEQTPYEVCEKH
IGSMSAFIHNGAVACNCHQVGAFSSSCSKFGGQCQCKPNVIGRCCDSCAPVTYGLGPNGC
SPFDCDPSGSTAELCDQTTGQCPCRDGVTGRRCDKCYPGYYGFPLCRQCQCNRLADICDP
ITGDCLYCREHSTGPNCESCKDGYVGDPVSGQPCEPCLCPDVDGSGRFFAISCNKDLYSG
APNCECLPGHTGQHCDSCAPGYYGDLRLPGGRCEECCCNNNIDSRDGDACDAVTGECLRC
IHNTEGPRCQSCKIGYYGNALAQDCKECSCDRRGTDDTKCPPGSPCFCDQETGECPCRKG
VKGALCNECADGYWNLDGESGCEPCNCDPEHALNYACEKITGQCFCQSEYGGRKCDECGP
NHFGNPDIQCISCDCNMEGTIFPACDTYTGECLCKPGVTGLFCDECAPGHNTNFPACEPC
HACFHLWEKIVSDIRIDAERIETMMPCPEDYRPPSDLQHLQDLLEKLQSLLNMTAQDELE
KLEKLLARIRNETETIDPNIIIIDPTVLLNTDIDNIRLEFNRLLKNLREKAKEVPVTDVK
ANDILNKIKKLYDEFTDSVKKVEAAKKTQEASRKTRENATLELAKCRIGEMDKLERKVKA
LSVANLNEEICGAPGDVECEKAKCGGALCGMCGGPACTGSLPISLNASKLAEVTEKNITA
LRNKLKEDDAKLMNTSKMTNYIKDQAEELMNKINQTKNKYEKEKTDTKNLIEKLNNYLRD
EMVRPEDIEKLANAVLSIQLPKSPDEIKDMIENIKKILANITDFNDDLEHLEKQAKIAEN
LKERAKEILNRTKAIDVREIEKVLNDTEELNDKIVNDLDEADENNYAISGKVNETEPKLK
NIEDNLDSTRAKKLLDEIQALKNKTEMNRAQGKEAKDAANAALASANDVNDDLEELKEQF
EKLKLNSTNQNVNEEANERLKNITMEAETLAKYVEDKMKNIEDLEKRILDAIERKEEKMK
DLEALQKEADYLKNFIVDKVEKYDLCST
NT seq 5487 nt   +upstreamnt  +downstreamnt
atgcagatccgatgggagacttcagcgttcctgcttctcttgatagcagctccagtccgc
ctccaggatgaatgtgtggggaattcgtgttatcctaacctcggtgacctcatggtgggc
cgagccgcccaactcactgcttcttcaacctgtggcctctacaggccgcaaaactattgt
atcctgggatacctggagaatgatcgcaagtgcttcacctgtgactccaggagcccctac
aatctccaccgcaatcccaacagccaccgcatagagaacatcatcaccaccttccaaccc
gaacgcaagatgaggtggtggcagtctgagaatggtgtgcatgaagtcagcattcagttg
gatctggaagcaatgtttcagtttagtcatttgatattgacattcaagagtttccgacct
gctgccatgttggtcgagaggtcaaaagacttcgggagaacctggaaggttttccgttac
ttcgcagaggactgtgccaactcattccccggcgtctctgaggagccagcagacagtctt
gatgacctcatctgtgacagtcgctactctggggcagagccatccaccgatggagaggtg
gtgttaaaagccttggatccaagttttgacatccatgatccatacgactctactatacaa
gagctgatcaccctgacgaacctccgagtaaactttacccgtttgatcaccctgggcgac
acgttgctcacgcgacggaggaggaacccacaggataagtattattacgccctctatgag
atggtcgttcgcgggacctgcttctgcaatggccacgccagtcagtgcgttcccgtggat
ggcacacgtggagacaccttcagtgagcctggcatggtgcacggtagatgtgtttgccaa
cacaacaccgtaggctacaactgtgagctctgtcaagacttctaccatgacgccccctgg
aggccagggggaaaaacagactcagatgtttgcagaagctgtaactgtcatggccattca
gagaagtgtcactttgacctagcacgctatctggccactggtggggttagtggtggtgtg
tgtgatgactgcaggaataaccgtgtaggatctcagtgtgagctgtgtgggccgtattac
taccaggaccctcaacgttctgtggacgaccccaacgcctgtataccttgtgaatgtgat
cctgatggctcagtggaccgtggtgtgtgtgatccagtgactggccagtgtgtgtgtaaa
cagaatgttgaaggagaacgctgtgaccgctgcaagtttgggttctacgggttcaaccgg
gatgaacctggcggctgtcagttgtgcaggtgtaatttcatgggaacgatacgcacggac
aacccttgtgatcagaccacaggaaggtgtatttgtgagcactttgcttacggcccacag
tgtgaccagtgtctgccaggttactggggtctgggaaacacagtctatggctgcttacct
tgtgactgtgacattggaggggccctaagatctgaatgttcctctgtggatggccagtgt
gaatgcaggcctaacatggtgggccacaaatgtagtgatccagctcctggatatttcctg
gctcctcttgatttctatatttatgaggctgagaatgcagtgcctctgtcggcaaattct
ccatttattcaggccccaacaacagtctacctcccagaacagatacctgaacgaccagcc
aagctccctctatgtccctttgctccgaaaccctccccaatacctaataaagaacctgaa
ccccaaacggtgaagccaacttcgaccccatacaacccccatgtcaccttgcccgtctgt
gaacactacttcagagagaggggttatgacttcaagattagtaatggaagggttgtggtg
tacaaacctgagaaacggaaaagacgaagacgaagacaaggccagaggacaatccccttt
gaaccaggctcatctctacagatcatccagcgagaacgtgtctcagatcagtctgtcact
tggactggaccgggttttgtccgagttcaggatggggaaggactcagatttactgtcagc
aatataccagcagctcttgattactatgtagttatccgctatgaaccagagtccaccgat
gattggacagctattgtgaacgttgtcccacttggatcaggggatggacgttgtcagaat
gacccatctgacaaagtgtttactctttcaggctctggaaggacagccactctggatcta
ccagtgtgcctcaatgatggtaataattactatgtggacgtcgcttttagaaagcagcac
aaagcaggccctcagaccagctcatacatcctgattgactctttgggcctcattcccaaa
gtggactccctcccaaacgtctgttcgcagtcacatctatctcagtttcagcaataccgc
tgtattgagttgggagcacaggcaggagagcaaaccccatatgaagtatgtgagaagcat
attggaagcatgtctgcctttattcacaatggtgcagtggcttgcaactgtcatcaagtt
ggagcgtttagctcatcatgcagtaaattcggtggacagtgtcaatgcaaacctaatgtt
attggccgttgctgtgattcctgtgctcctgtgacgtacgggcttggacccaatggctgc
tcaccatttgactgtgatccatctggctctaccgctgaactgtgtgaccagacaactggt
cagtgcccgtgtcgagatggagtaactggccgtcgttgtgataaatgttaccctggttac
tatgggtttcccctgtgcagacaatgccaatgcaacaggttggctgacatctgtgacccc
atcactggagactgtttgtactgcagggaacactccacgggaccaaactgtgaaagctgt
aaagatggttatgttggtgaccctgtctctgggcagccatgtgagccatgcttatgtcca
gatgtggatggaagtggacgtttctttgccatttcctgcaacaaggatctgtactctgga
gccccaaactgtgaatgtctgcctggacatacaggccaacactgtgactcctgcgctcct
ggttattacggtgacctgaggttgccaggtggccgatgcgaggagtgctgttgcaacaat
aacattgattctcgagatggtgatgcatgtgatgctgtgactggcgagtgtttgcgctgc
atacacaacacagaagggccgcgatgtcagagctgcaaaattggatactatggcaatgct
ctcgctcaagactgcaaagagtgttcttgtgaccggagaggcacagatgacacaaagtgt
ccacctggaagcccctgtttctgtgaccaggaaaccggcgagtgcccatgtcgcaaaggt
gtcaaaggagccctttgtaatgagtgtgcggatggatactggaacctggatggggagtct
gggtgcgagccttgcaattgtgacccagaacatgctctcaactacgcctgtgaaaagatc
acaggccagtgtttctgccagtcagagtatggaggcagaaaatgtgatgagtgtgggccg
aatcactttggaaacccagatatacagtgcatatcttgtgactgtaacatggagggcacc
atttttccagcttgcgacacttacaccggtgagtgtttgtgtaagccaggggtgacaggc
cttttctgtgatgaatgtgccccgggtcacaacaccaactttcctgcctgtgaaccctgc
catgcctgcttccacctctgggagaaaatcgtctcagatattagaatagatgctgagagg
atagaaactatgatgccttgccctgaagactatcggcctccatctgatctacaacactta
caggatttgttggagaagttgcagagtcttcttaacatgactgctcaggatgagcttgaa
aaactagagaagctcttggcacgcattaggaatgaaacggagaccattgacccaaacata
atcattattgatccaaccgtacttctcaacactgacatcgacaacatccgccttgagttc
aataggctgttgaagaatctcagagagaaggcaaaagaggttccagtgacagatgtaaaa
gctaatgatattttgaataagatcaaaaagctctatgacgaattcactgacagcgtgaag
aaagtggaagcggctaaaaagacccaagaagcctccaggaagacaagagagaatgccaca
ttggaacttgcaaagtgtcgcataggagaaatggataagctggaaaggaaagtgaaagct
ctgagcgttgccaatctcaacgaggagatctgtggggctccaggtgatgtagaatgtgag
aaagcaaaatgtggtggagctttgtgtgggatgtgcggggggccggcctgtacggggagt
ttacccatcagcctcaatgcctccaaactggcagaggtgaccgagaagaacatcactgct
ctgcgcaataaactcaaagaagatgatgcgaagctcatgaacacctcaaaaatgactaat
tacatcaaagatcaagcagaggagctgatgaataaaattaatcagactaagaacaaatat
gagaaggaaaagactgacaccaagaacctcatagagaagctcaataactacctaagagat
gagatggtgaggccagaagacattgagaaactggccaatgctgtgttgtccattcagcta
cccaagtcccctgatgagatcaaggacatgattgagaacatcaagaagatcttggcaaac
atcacagacttcaacgatgatctagagcacttagaaaaacaagccaaaattgcagaaaac
ctgaaggagagggccaaagaaatcttgaacagaaccaaggcaattgatgtaagggagata
gagaaagtactgaatgatacagaagagctcaatgacaagatagtcaatgatctggatgag
gctgacgaaaacaattatgctatcagtggcaaagttaatgagactgaacctaaactgaaa
aacattgaggacaatttggattcgactcgagccaaaaagttattggatgaaatccaggcc
ttgaagaataagacggagatgaacagagctcaggggaaggaggccaaagatgctgccaat
gcagctctcgccagtgccaatgatgtcaacgatgatcttgaagaactgaaagagcagttt
gaaaaattaaaactgaatagcacaaaccagaatgttaatgaagaggctaatgaacgtcta
aagaacatcacaatggaggcagagacgctggctaaatatgtggaagataaaatgaagaac
attgaagacttggagaaaaggattctggatgcaattgaaagaaaagaggaaaagatgaaa
gatttggaggcactccagaaggaggcagattatttgaagaactttattgttgacaaagtg
gaaaaatatgatctgtgctccacttaa

DBGET integrated database retrieval system