Squalius cephalus (European chub): 307153293
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Entry
307153293 CDS
T11930
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform 1
KO
K14307
nucleoporin p58/p45
Organism
scep Squalius cephalus (European chub)
Pathway
scep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307153293 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scep03019
]
307153293 (nup58)
Messenger RNA biogenesis [BR:
scep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
307153293 (nup58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
FapA
GCP_N_terminal
Nup49_C
XAC0095_dom
PSY3
MSC_0620_UU052
Phage_int_SAM_2
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
307153293
NCBI-ProteinID:
XP_079718761
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All DBs
Position
25:10023831..10036063
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AA seq
590 aa
AA seq
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MSSFNFGTSTLGSSATGGFSFGAATSTPAAGTGGFTLGGFGTPSSAPAATSTTSTLGFGS
SVFAQKPTTGFSFNTPASGAAPSTTGLTLGSLTTSTAGSTGFSLGFGKPAASAAPFSLTT
TTSAPPGTGLTLGSVLTSTAPQTSSTGFSLNLGGATTTSSAPAPGFSFSSSLFSNPTLTG
LGQSTLGGALSLGGLVSSSVGATSVGAPSLGLGGVDFSTSSEKNTDKLSSTRPEDSKALK
EENLPGPICQDVDNFQKFVKEQKQVQEEISRMSSKAILKVQEDIKTLRQLLSVCASGLQR
NSLSIDKLKLETSQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQFEVQLQQYRQQ
IEELENHLTTQSSGSHITPQDLSLAMQRLYQTFVALAAQLHAVHENVKTLKHQYLGYRRA
FLDDSSDVFELKRVAGKKWQSSPHVTTGPAPFGSVPNAAAVAMAATLTQQQQPAPGPQAP
LGASFGTPFSSGIGTSMGSSSLGAFGSGPGFGGATGGLSFGFSSSKPSGGSLSAGFGTSN
TSGFNFSNPGINASAGLTFGVSNTQTPGFGAGGPLLQLKKPPAGNKRGKR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctttaacttcggcacaagtaccctcgggtccagcgccaccgggggcttctca
tttggagctgcgaccagcacacctgctgcaggcacgggtggattcacactcggaggtttt
ggcacgccgtcctccgcaccggccgcaactagtaccacctccacactgggatttgggtcc
agtgtatttgcacagaaaccaacaactggattctcctttaacacacctgcctcaggggct
gctccttccactactggccttactttagggagtcttaccacctctactgctggatccact
gggttcagcctgggtttcggcaagccggcggcctctgcagcaccattctcactgaccacc
accacctctgcacctccaggcacaggtctgactctgggctccgtcctcacctccacagca
ccccagaccagctctactggcttctcccttaatttgggaggagcaaccaccacttcatct
gcacctgccccgggtttttcctttagttccagtctcttttccaaccctaccttgacaggg
ttgggacagtctacattaggtggagctctgagtctgggtggtttagtctcttcctctgtc
ggagccacctctgtcggagcacccagtctcggcctgggtggagtggacttcagcacctcc
tctgaaaagaatactgacaagttatccagcaccagaccggaggacagtaaagccctcaaa
gaggaaaacctccctggtccgatctgtcaagatgtggataactttcagaagtttgtcaag
gaacagaagcaagtccaggaagagatcagcagaatgtcctctaaagccattctcaaagtg
caggaggacatcaagacgctcagacagctcctctctgtctgtgccagcgggctgcagaga
aattcgctctccatagacaagctgaagttggaaacttctcaggaattgaagaatgctgat
attgcacttcgcacccagaagacccctcctggactccaacatgaaaacacagcaccgtct
gattatttccggtctctggtggagcaatttgaggtgcagttacagcagtaccgtcagcag
attgaagaactcgagaatcatctgaccacccagagcagtggctcccacatcacacctcaa
gatttgtccttggccatgcagagactctaccagacgtttgttgcacttgctgcacagtta
catgcagttcatgagaatgttaagactctcaaacatcagtacctgggctacagacgagcc
ttcctcgatgactcctctgacgtgttcgagttgaagcgtgttgccggcaagaaatggcag
agctctccgcacgtcaccacaggccccgcccccttcggcagcgttcccaacgcagcagcc
gttgccatggctgccactctcactcagcagcagcagccggctccaggacctcaggcgccc
ttgggggccagttttggcactccattttcctcgggtattggcactagcatgggctcatca
agcctcggagcgtttggtagcggccctgggtttgggggcgcaacaggaggtttgtcgttc
gggttttcctctagcaagccatctggagggagcctgagcgcaggatttggaacatctaac
acctcgggcttcaacttcagtaacccaggcatcaatgcatcggctgggttgacctttggc
gtttccaacacacaaactcctggatttggggcaggtgggccactgctacagctcaaaaaa
ccaccagcgggaaacaagaggggcaagagataa
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