Squalius cephalus (European chub): 307155484
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Entry
307155484 CDS
T11930
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform 1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
307155484 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scep01007
]
307155484 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scep03016
]
307155484 (kars1)
Enzymes [BR:
scep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
307155484 (kars1)
Amino acid related enzymes [BR:
scep01007
]
Aminoacyl-tRNA synthetase
Class II (A)
307155484 (kars1)
Transfer RNA biogenesis [BR:
scep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
307155484 (kars1)
Prokaryotic type
Other AARSs
307155484 (kars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
307155484
NCBI-ProteinID:
XP_079722286
LinkDB
All DBs
Position
3:complement(54609973..54625075)
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AA seq
601 aa
AA seq
DB search
MLNLVRICRLQAFRAQTFALPSSQSLPLLIQGSRWRSGKSELKRRMKAEKKAAEKEAKIK
EQQEQETNDKPQQNAYGADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKFHVDLSLMEF
IERYSHLQPGDHLTDVVLSLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYKSEED
FVHINNKLRRGDIIGVRGNPGKTKKGELSIIPVEMTLLSPCLHMLPHLHFGLKDKETRFR
QRYLDLILNDSVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFVTYHN
ELNMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYH
DLMEITEKLLSGMVKHVTGGYKVTYHPDGPEGQAQEIDFTPPFRRISMTQDLEKELGVKF
PAPDTYDSDETRKFLDDLCAQKEVECPPPRTTARLLDKLVGDYLEVKCINPTFICDHPQI
MSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAKAEGDDEAMF
IDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEENKAASPAEGTS
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctggtcagaatatgcaggctgcaagcgttcagggcacagacgtttgctctt
cccagttcacaaagcctgcctttgcttattcaaggaagtcgctggagaagtggcaaaagt
gagctgaaaaggcgcatgaaagctgagaagaaggcagctgagaaggaagccaagatcaaa
gaacagcaggaacaggaaaccaatgacaagccacagcaaaatgcatatggggctgatgag
gaaaccctggacccaaatcaatacttcaagatccgttcacaagccattcaagccttgaag
ggaacagctgaagacccgtaccctcacaagttccatgtggacttgtcgcttatggagttc
attgagcgatatagccaccttcagccaggggaccacttgactgatgttgtcctcagttta
tcaggtcgtgtccacgctaagagggcttcaggtgccaagctgctgttctatgacctgcga
ggtgaaggagtcaagctgcaggtcatggccaactccaggaactacaaatcagaagaagat
tttgtgcacatcaacaacaaattaaggcgcggggacatcattggtgtccgggggaatcct
ggcaagacaaagaagggcgagttgagcatcatcccagtggagatgacactgttgtctccg
tgccttcatatgcttccccaccttcactttggcctgaaagacaaggaaaccaggttccga
cagcgatatctggacctgattcttaatgactctgtgcgacagaagtttgttacccgttcc
aagattatcacttatctccgcagttttctggaccagcttgggtttcttgagattgaaaca
ccgatgatgaatctgatacctggtggtgctgtagcaaaaccttttgtcacctaccacaat
gagctcaatatgaacctctacatgagaattgctcctgagctttaccataagatgttggta
gtcggtggaatcgaccgtgtgtatgagatcgggcgtcagttccgtaatgaaggcatcgat
ctcacccacaaccctgagttcaccacatgcgagttctacatggcttatgcggactatcat
gacctgatggaaatcacagagaagcttctctcaggaatggtgaagcacgttaccggaggc
tataaggtgacgtatcatcctgatggtccagaaggacaagcccaagaaatagacttcact
cctcccttcagacggatcagcatgactcaagacctggagaaggaattgggagtgaagttt
ccggctcctgacacctacgacagtgatgaaacgcgcaagttcttagatgacctttgtgct
cagaaagaagttgaatgccctcctcctaggacaactgctcgtcttctcgataagttggtg
ggagactacctggaggtgaagtgcatcaacccaacattcatctgtgatcatccacagatc
atgagtcctctagcaaaatggcacagatcacagaaaggtctgaccgagcgcttcgaactc
tttgtgatgaagaaggagatatgcaatgcctacacagagttgaacgatcctatcagacaa
cgagaactgtttgagcagcaggctaaggccaaggcagaaggtgacgatgaggcaatgttt
attgatgagaccttctgcactgccttggagtacgggcttccacccacggctggatggggc
atgggcatcgaccggctcaccatgttcctcacggactccaacaacatcaaggaggtgctt
ctcttccctgctatgaaacctgaagaaaataaagcagcttcacctgcggagggcacatca
gtgtaa
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