Squalius cephalus (European chub): 307155493
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Entry
307155493 CDS
T11930
Symbol
tsg101b
Name
(RefSeq) tumor susceptibility gene 101 protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
scep Squalius cephalus (European chub)
Pathway
scep03250
Viral life cycle - HIV-1
scep03272
Virion - Hepatitis viruses
scep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
307155493 (tsg101b)
03272 Virion - Hepatitis viruses
307155493 (tsg101b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
307155493 (tsg101b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307155493 (tsg101b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scep04147
]
307155493 (tsg101b)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
307155493 (tsg101b)
Exosome [BR:
scep04147
]
Exosomal proteins
Proteins found in most exosomes
307155493 (tsg101b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF3450
UQ_con
CEP135_N
Het-C
SSNA1
ENTR1
HAUS1
CRWN_second_CC
DUF7260
LEKR1
CCDC90-like
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
307155493
NCBI-ProteinID:
XP_079722299
LinkDB
All DBs
Position
3:complement(34480526..34485901)
Genome browser
AA seq
391 aa
AA seq
DB search
MTTMNENSLRKILMKIYKYRDLTARDLNVTSHYKDLKPVLDHYVFNDGSTKELLSLAGTV
PVNYRGNVYNIPICLWLLDTYPYNPPICFVKPTSAMMIKPGKHVDANGKIYLPYLHEWKP
PQSNLLGLIQMMILVFGEEPPVFSRPSTQATYPAYPAAGPPNTSYMPSTPGLPYSQGHSA
NTGGFQGYPYPATASGYPSTGSSLYNPVSPVTTVGPTRDGTIGEDTIRASLVSAVSDKLR
WRMKEEMDRAQAELDALKRTEEDLKRGHQKLEEMVTKLDLEMADVDKNIDSLKQKDEELT
VALERMQNQSEDNDLDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRDVIDLDVF
LKHVRLLSRKQFQLRALMQKARKVAGLSDLY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaatgaacgaaaattctctacggaaaattctgatgaagatttataaatacagg
gatctgaccgcacgcgacttaaacgtgacgtctcactataaagatcttaaacctgtgttg
gaccactacgtgttcaatgatggctctaccaaagagctgctgagtctcgcaggaacggtg
ccagtaaactacagaggaaatgtgtacaacattcccatctgcctgtggcttcttgacacg
tatccctacaaccctcccatctgttttgtcaaacccacaagtgccatgatgataaaaccc
gggaaacacgttgatgccaatggaaagatttacctcccatacctgcatgaatggaaacct
ccccagtctaatttgttgggactgatccagatgatgattctggtgtttggagaggaacca
ccagtcttctcacggcccagcactcaggcaacttacccagcttacccggcagcaggccca
cctaacacttcctacatgccaagcacaccaggcttgccttatagtcaaggacactcagcc
aatacagggggatttcagggctacccttatcctgcaacagcttctggatacccctctacc
gggtcctctctctataacccggtgtcgcctgttactacagtggggcccactcgtgatggt
accatcggagaggacacaatccgtgcatctctggtgtctgcggtcagtgacaaattgcgc
tggcggatgaaagaagagatggatcgagcacaggcagagctggatgccctgaaaaggaca
gaggaggacctgaagagaggccaccagaagctggaggagatggtgaccaaactagacctg
gagatggctgatgtggacaaaaacatcgatagcctcaagcagaaagatgaggagctgact
gttgcactggagagaatgcagaaccaatctgaggacaatgacctcgatgatgtgattgtg
ccgaccgctcctctttataagcagattctgaacctctacgctgaagaaaacgccattgaa
gacactatcttctacttgggtgaagcgttacgcagagatgtcattgacttggatgtcttc
ctcaagcatgtgcgcctcctctccagaaaacagttccagttgcgagccttgatgcagaag
gcccggaaagtagcaggcctcagtgacctgtactga
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