Squalius cephalus (European chub): 307155569
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Entry
307155569 CDS
T11930
Symbol
sema4f
Name
(RefSeq) semaphorin-4F isoform 1
KO
K06521
semaphorin 4
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
scep04090
]
307155569 (sema4f)
CD molecules [BR:
scep04090
]
Proteins
307155569 (sema4f)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
Ig_Sema4F
Sema4F_C
PSI
Motif
Other DBs
NCBI-GeneID:
307155569
NCBI-ProteinID:
XP_079722430
LinkDB
All DBs
Position
3:39002318..39074549
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AA seq
801 aa
AA seq
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MKSVTGLFALTVLLCYTISSWSATINSHGADISKLGSLELRSIYNYSTFLLDRASGMLYL
GARDAIIAVDTANLSKRKLIEWSVPEDRRKSCVAKGKTEDDCKNYVRLLEFLEDGRIYAC
GTFAFDPQCGFINISSFSLEKHDDGSMMMETGKGKCPFEPSQHYTAVMAGGILYTAATSN
FLGTMYDISRATGIEQERIRTEQSINWLSDPEFVSSAFIQEDEKNNPAGEDDKIYFFFTE
VAKEYDLYTKVKVPRVARVCKSDVGGMKTLQRRWTTFLKAQLVCEDRASGQRFNVLTDVF
TVQHQPGDPSSTHFYGIFTSQWEREELSAVCVYSLEEITKVMNGPFKELKKSCENWINPE
PIPTPRPGQCLNSALKEQGFESSLKLPDKVLTFTRDHPLMENSVVAAPLMIRNGITYTKL
AVTLITPSSDTKQQTATVLHLGTDHGELHKVAVVGPNATLIEEVPLFSAQEPVNNILLYK
DEALVGSPLSLVKVPIVGCSLYSTCEVCARARGLGCVWRNKEGACAMAKAGEVVESEDLV
RQCNKGEGLCSPPVIEMRVEEGLRVLLSCVQVSPRPCRWENPPGSHTRRHNYDLEVQVTA
ESLGTYTCLCDEVGRDQPPCRKAEYQLTLENPSMGGNVAIAGNRHFLASHIIFFVIGFVL
GVILLFLIYKRQGGMRGSGHSSSTSEKGRDLLPSTDTPQSPSSASLLSEAVPLTEKRNGT
LNGHSMHPGGHNGRHIYTNTSGLKLQESAVNLAEELDGRERAGPDGEEEGLGEVLSELEE
EFSKMPCLRGAPLAQCEESSI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagttactggtctgtttgctttaactgtgttgctgtgttacacgatctcatcc
tggagcgccactatcaacagccatggagcagacatttctaagctgggttcccttgaattg
agaagcatatataactacagcaccttcctgttggaccgtgcgtctgggatgctctacctt
ggtgcgcgtgatgcaatcattgccgtggatactgctaacctatcaaagaggaagttgatt
gaatggagtgttccagaagacaggaggaaatcttgtgttgctaaggggaaaaccgaggat
gactgtaagaactacgtccgtctgctggagtttttggaagacggacgcatatatgcctgt
gggaccttcgcctttgatccccagtgtggttttattaacatctcttcattctctctggag
aaacatgatgacggtagcatgatgatggagacagggaaggggaaatgcccctttgagccc
agccagcattacaccgctgtcatggcaggagggatcctttacactgccgccacaagtaac
ttccttggcacaatgtatgacatttccagggcaacgggcatcgagcaggaacgcatccgg
actgagcaatcaatcaactggcttagtgatccagagtttgtcagttctgccttcatccaa
gaggatgagaagaacaatcctgctggtgaagatgacaaaatttacttcttcttcactgag
gtggctaaagagtatgacctctacaccaaagtcaaagtgcccagagttgccagggtctgt
aagtctgatgtaggtggtatgaagactctgcagaggcggtggacgacgtttctgaaggct
cagctggtgtgtgaagatcgagcaagtggacagcgctttaatgttctgactgatgtgttt
actgtacagcaccagcctggagaccccagcagcacacacttctatggcatattcacctca
cagtgggaaagagaggagctgtcagccgtgtgtgtgtacagtctggaggagatcactaag
gtgatgaacggaccctttaaagagctgaagaagagctgtgagaactggattaacccggag
cccattccaacaccacgaccaggacagtgtttgaatagtgctctgaaggagcagggcttt
gagtcctccctgaagctgcctgataaagtgctgacgttcacacgtgatcacccgctcatg
gagaacagtgtggtggcggcaccattaatgatcagaaatggcatcacatacactaaactt
gccgttaccttaataacgccctccagtgacacgaagcaacaaacggccactgttttgcac
cttggaacagatcatggagagctacacaaagtcgctgtagttggtccaaatgcaactctt
attgaggaagtccccctgttttctgcacaggagccagtgaataacatattgctatacaaa
gatgaggctctggtgggttctcctctctctctggtgaaggtacccatagtgggttgttct
ctgtactctacctgcgaggtgtgtgcacgtgcccgaggccttggctgtgtatggaggaat
aaagagggagcttgtgctatggcgaaggcaggagaagtggtagaatcagaagatttggtc
aggcaatgcaacaaaggtgaaggtctttgttctccacctgtaattgaaatgcgtgtggaa
gagggtctgcgcgtcctgctttcgtgtgtgcaggtgtctcctcgtccttgccgctgggag
aatccccctggcagtcacacccgccgccacaactatgacctggaggtgcaggtcacagcg
gagagcctgggcacatacacgtgcctatgtgatgaagtgggcagagatcagccaccctgt
cgcaaagccgagtaccaactgacccttgaaaaccccagcatgggggggaacgtggccatt
gcgggtaaccgacacttcctggcctcgcacatcatttttttcgtcataggttttgtattg
ggtgtcatcctgttgtttctaatttacaaacggcaaggtggcatgagagggagcgggcac
tcatcgtccacatcagaaaaggggcgggacttgcttccttcaacagacacgccgcagtct
ccaagcagcgccagtctgttgtcggaggctgttccgttaacagagaaaaggaacgggacg
ctgaacggacacagtatgcacccaggtgggcacaacggcaggcatatttacaccaacaca
agtggactgaaactgcaggagtcagctgtgaacctggcagaggagctggatggtagagaa
agggcggggccagatggagaggaggagggactaggggaggtgcttagtgagttggaggag
gagttttctaaaatgccttgcctaagaggagcaccactggcacagtgcgaagaaagctcg
atctga
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