Squalius cephalus (European chub): 307155679
Help
Entry
307155679 CDS
T11930
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
scep Squalius cephalus (European chub)
Pathway
scep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
307155679 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scep03009
]
307155679 (efl1)
Ribosome biogenesis [BR:
scep03009
]
Eukaryotic type
Pre-60S particles
GTPases
307155679 (efl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
307155679
NCBI-ProteinID:
XP_079722637
LinkDB
All DBs
Position
3:14685682..14782789
Genome browser
AA seq
1141 aa
AA seq
DB search
MTHDACDGQLICASWTGGNIKSKMGHTSLEKIIALQKKTSQIRNLCILAHVDHGKTTLAD
CLVASNGIISSRLAGKLRYLDSREDEQIRGITMKSSAISLHCTTGGNDYLINLIDSPGHV
DFSSEVSTAVRLCDGAIVVVDAVEGVCPQTQVVLRQAWLENIRPVLVINKIDRLIVELKL
TSQEAYTHLQKILEQVNAVTGTLFTSKVLEERAEKNAEAQSSCTENDSGDQVYDWSAGLE
ETDDSDLYFSPDRGNVVFASAIDGWGFRIHQFAEMYSQKMGIRFWVLLKTLWGDFYLNAK
AKKIMKGAQSKGKKPLFVQLVLDNIWSMYDAVVTTRDKEKVEKMVTSLGIKVMPRDLKHS
DPKVLLSAICSQWLPVSQAVLSMVCEKLPSPAEISAERVEKLMSVGARRFDSLPEKTQEL
KKAFLDCSADETAPVIVFVSKMVSVDSKALPQNKQRPLTQEEIAQRRELARQRHAERQAA
NQSAESPGSADAGGTSSPAAPAIDALCAQTEALSVKTAVEEENKEHFVAFARVYSGVVRK
GQKVFVLGPKYDPSLALRVLPEGCSVADALPSVPHMACCTVDSLYLLMGRELEELEEVPS
GNVLGIGGMEEFILKSATISTSPACPPFTPINFEATPIVRVAIEPKHPSEMPKLVRGMRL
LNQADPCAEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASEPIIPFRETVIRP
PKVDMVNEDLGKQQKVAVIHQVKDDQTKYHEGVQVDSTGLVTLTTSNKMATVRVRAIPLP
EEVTRLLEDNVELIRTIEQFSLFAWEGKTLEINQKILENIQDFKVKLESTLQGHKWRGAV
EHIWAFGPRRCGPNILLNRIEGYRRPSVWQCLEREKEIEKAETTAFRDFDNSIVSGFQLA
TLSGPMCEEPLMGVCFSVESWDMKISTPLTQQDSIAEESQMQSQIGEYSDVHVSSTSSNR
SRSRAETAGGSLDCYGPFSGQLIAAMKETCRYAFQAKPQRLMAAMYTCEIMATAEVLGRV
YAVLSKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEV
IPSDPFWVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVDEKIVEHGEKQRTLSKN
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgacgcgtgcgacggtcagctcatttgtgcttcctggactggaggaaacata
aagtcaaaaatgggtcacacaagtttggagaagataattgcactgcagaagaagacgtca
cagatcagaaacctgtgtattcttgctcatgtagatcacggaaagacgacattagccgac
tgtcttgtggcgagtaatggtattatatccagtcgtttagcaggaaagctgagatatctg
gacagcagggaggatgagcagatcagaggaatcacaatgaagtccagcgctatttcatta
cattgcaccacaggaggaaatgattacctcattaatctgatcgactctcccggtcatgtg
gacttctcctcggaggtgtccactgccgtcagactgtgtgatggggccattgttgttgtt
gatgccgtcgagggagtgtgtccgcagacgcaagttgttttacgacaagcttggctggag
aatattcgtcctgttcttgtcatcaacaaaattgaccggctgattgtggagctgaaactc
acttcacaggaggcgtacactcacctgcagaaaatactagagcaggtgaacgcagttacc
ggcaccttattcacctctaaagttctggaggagagagcggagaaaaacgcagaagctcag
agcagctgtaccgagaacgacagcggagatcaggtgtacgactggagcgcgggtttagag
gaaactgatgactctgacctctacttcagtcctgaccggggaaatgtggtatttgccagt
gctatagacggctggggcttcagaatccatcagtttgctgagatgtacagtcagaaaatg
ggcatccgcttctgggttctgctcaagactctgtggggcgatttctacctcaacgccaaa
gccaaaaaaatcatgaagggagctcagtccaaaggaaagaaacctctgtttgtgcagctt
gtcctggataacatctggagtatgtatgacgctgtggtcactacaagggacaaagaaaag
gtggagaagatggtgacttctctggggataaaagtcatgcctcgtgacctaaaacactca
gaccccaaagtgctcctcagtgccatctgtagccagtggcttcctgtgtctcaagccgtg
ctctcgatggtgtgtgaaaagctgcccagcccagctgagatctcggctgagagagtggaa
aagctgatgagcgtgggagcgcgcaggtttgactctctgcccgagaaaacacaggagcta
aaaaaagcatttctagattgttcggctgatgagacggcgcctgtaattgtctttgtgtca
aagatggtttccgtggactccaaagctctgccacagaacaaacagaggccgttgactcag
gaggagatcgcccagagaagagaactggccagacagcgtcacgccgagagacaagctgcc
aatcagagtgcagaaagccccgggtcagctgatgctggaggtacttcatccccagcagcc
ccagccatcgatgctctgtgtgcgcagacggaggctctttcagtcaaaactgcagtggag
gaggaaaacaaagaacattttgtggcctttgcacgagtctacagcggtgtcgtcagaaaa
ggccaaaaggtgtttgtgctcggacccaaatacgatccatcactggcgctcagagtgctt
cctgagggttgttcagtagctgatgctctacccagcgtcccccacatggcctgctgtacc
gtagacagcctctacctgctgatgggccgcgagctggaagaactggaggaagttccctca
ggaaatgttctcggtattggtggcatggaggaattcattctcaagtcggccaccatctcc
acatctcctgcctgcccacccttcacgccaatcaactttgaagctacgcccatcgtcaga
gtcgcaatcgagcccaaacatccaagtgagatgccgaagctggtgcggggtatgagactg
ctgaaccaggccgacccttgtgccgaagtgttgattcaggagactggagagcatgttctg
gtcactgcaggggaagtgcacctacaacgctgtctggatgacttgagagagaggtttgct
aaaattgaaatcagcgcttccgaaccaatcatcccattccgcgagacggtgatccggcct
cccaaagtggacatggtgaacgaggacttggggaagcagcagaaagtcgctgtgattcac
caggtaaaggacgatcaaacaaagtatcacgaaggggtccaggtggattccactggtctg
gtcacgctcaccacctcaaacaagatggccacggtcagggtgcgggctatccctcttcct
gaggaagtcacccgccttctggaggacaatgtggagctcatccgcacaatagagcagttc
agcctgttcgcctgggagggcaagactctggaaatcaaccagaaaattctggagaacatc
caggacttcaaggtgaaattggagagcaccctgcaaggccacaaatggaggggtgccgtg
gagcatatctgggcatttggtccacgccgttgtgggccaaatattctcctcaacagaatc
gagggataccggagaccctcagtgtggcagtgtctggaacgagagaaggaaattgaaaag
gctgagaccaccgcatttagagactttgacaacagcattgttagtggcttccagttggcc
acactctctggtcccatgtgtgaagaacctttgatgggggtttgcttctctgtagagtcc
tgggacatgaagatttccacacctcttactcagcaagactcaatagctgaggagtcccaa
atgcagagccaaataggtgaatattctgatgttcatgtctcatccacaagctctaaccga
agcaggagcagagcggagactgctggtggttcactggactgttatgggccgttctcagga
cagctcatcgctgccatgaaagagacctgcagatacgctttccaagctaaacctcagcgg
ctgatggctgcgatgtacacctgcgaaatcatggccactgctgaggtcctgggtcgtgtg
tatgctgttttgtccaagcgggaaggacgagtcctacaagaggaaatgaaggaagggacg
gaaatgttcatcattaaagctgtacttcctgttgccgagagcttcggattcgctgacgag
atcaggaagaggaccagcggcctggccagtccacaactagtcttcagccactgggaggtt
atccctagtgatccattctgggtgccgactaccgaggaggagtatttacactttggagaa
aaagcagactcagccaatcaggctctgaaatacatgaacgccgtacgaagacgcaaaggc
ctctatgtggacgagaagatcgtcgaacacggggaaaaacaacggactctcagcaagaac
aaataa
DBGET
integrated database retrieval system
